Parental gene: | FBLIM1, ENSPTRG00000000208 |
| Aliases: | None |
| Description: | filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:24686] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:15881030..15898108(+) |
>ENSPTRG00000000208
ATGGCCTCAAAGCCTGAGAAGAGGGTGGCATCATCTGTCTTTATCACCCTGGCACCCCCGCGCCGCGATGTGGCCGTGGC
GGAGGAAGTGAGGCAGGCAGTTTGTGAGGCCCGGCGTGGCCGCCCCTGGGAGGCTCCTGCCCCCATGAAGACACCCGAGG
CTGGCTTGGCGGGGAGGCCTAGCCCCTGGACAACCCCTGGCAGAGCTGCAGCCACAGTGCCAGCTGCACCTATGCAGCTC
TCCAATGGAGGATGCCCACCCCCTCCTCCTGTCCTGGATGGTGAGGACGTGCTTCCTGACCTGGACCTCCTCCCACCCCC
TCCACCACCCCCTCCGGTGCTTCTGCCTTCTGAAGAGGAGGCTCCTGCTCCAATGGGGGCCTCACTCATTGCAGACTTAG
AGCAGCTGCACCTGTCCCCGCCCCCGCCCCCACCACAGGCCCCAGCGGAGGGACCTTCAGTCCAGCCCTGTCCCCTCAGG
CCCGTGGAGGAAGAGCTGCCACCTCCCCCGGCAGAACCTGTTGAGAAAGGGGCATCCACAGACATCTGTGCCTTCTGCCA
CAAGACCGTGTCCCCCCGAGAGCTGGCTGTGGAGGCCATGAAGAGGCAGTACCATGCCCAGTGCTTCACGTGCCGCACCT
GCCGCCGCCAGCTGGCTGGGCAGAGCTTCTACCAGAAGGATGGGCGACCGCTCTGCGAACCCTGCTACCAGGACACACTG
GAGAGGTGCGGCAAGTGTGGCGAGGTGGTCCGGGACCACATCATCAGGGCCCTGGGCCAGGCCTTCCACCCCTCCTGCTT
CACGTGTGTGACCTGCGCCCGGTGCATTGGGGATGAGAGCTTTGCCCTGGGCAGCCAGAACGAGGTGTACTGCCTGGACG
ACTTCTACAGGTACGAGAAGGGTTTGTGCACCGGGTGGGGTGCAGGGACAGGGCGAGACCCAAGCAGGATGAAGGAGCTG
AGCTTGAGTCCTGGGTGCTGGGCCAGAGTTTCCTGTCTACCGGTTTATTATAAAGAATATTACAGGGCTGGGCTGGGCGT
GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCTCGAGGTCAGGAGATCGAGATCATCCTG
GC
ATGGCCTCAAAGCCTGAGAAGAGGGTGGCATCATCTGTCTTTATCACCCTGGCACCCCCGCGCCGCGATGTGGCCGTGGC
GGAGGAAGTGAGGCAGGCAGTTTGTGAGGCCCGGCGTGGCCGCCCCTGGGAGGCTCCTGCCCCCATGAAGACACCCGAGG
CTGGCTTGGCGGGGAGGCCTAGCCCCTGGACAACCCCTGGCAGAGCTGCAGCCACAGTGCCAGCTGCACCTATGCAGCTC
TCCAATGGAGGATGCCCACCCCCTCCTCCTGTCCTGGATGGTGAGGACGTGCTTCCTGACCTGGACCTCCTCCCACCCCC
TCCACCACCCCCTCCGGTGCTTCTGCCTTCTGAAGAGGAGGCTCCTGCTCCAATGGGGGCCTCACTCATTGCAGACTTAG
AGCAGCTGCACCTGTCCCCGCCCCCGCCCCCACCACAGGCCCCAGCGGAGGGACCTTCAGTCCAGCCCTGTCCCCTCAGG
CCCGTGGAGGAAGAGCTGCCACCTCCCCCGGCAGAACCTGTTGAGAAAGGGGCATCCACAGACATCTGTGCCTTCTGCCA
CAAGACCGTGTCCCCCCGAGAGCTGGCTGTGGAGGCCATGAAGAGGCAGTACCATGCCCAGTGCTTCACGTGCCGCACCT
GCCGCCGCCAGCTGGCTGGGCAGAGCTTCTACCAGAAGGATGGGCGACCGCTCTGCGAACCCTGCTACCAGGACACACTG
GAGAGGTGCGGCAAGTGTGGCGAGGTGGTCCGGGACCACATCATCAGGGCCCTGGGCCAGGCCTTCCACCCCTCCTGCTT
CACGTGTGTGACCTGCGCCCGGTGCATTGGGGATGAGAGCTTTGCCCTGGGCAGCCAGAACGAGGTGTACTGCCTGGACG
ACTTCTACAGGTACGAGAAGGGTTTGTGCACCGGGTGGGGTGCAGGGACAGGGCGAGACCCAAGCAGGATGAAGGAGCTG
AGCTTGAGTCCTGGGTGCTGGGCCAGAGTTTCCTGTCTACCGGTTTATTATAAAGAATATTACAGGGCTGGGCTGGGCGT
GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCTCGAGGTCAGGAGATCGAGATCATCCTG
GC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .79 RPM |
| SRP007412_cerebellum | 3 .30 RPM |
| SRP007412_heart | 10 .49 RPM |
| SRP007412_kidney | 9 .52 RPM |
| SRP007412_liver | 3 .08 RPM |
| SRP007412_testis | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018725 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000162458 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015190 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000032243 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001837 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000009000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_544 | 82.06 | 59.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_3266 | 83.59 | 67.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000208 retrocopies