Parental gene:

FAM175A, ENSG00000163322

Aliases:FAM175A, ABRA1, CCDC98
Description:family with sequence similarity 175, member A [Source:HGNC Symbol;Acc:25829]
Organism:Human (Homo sapiens)
Coordinates:4:84382091..84444501(-)


>ENSG00000163322
ATGGAGGGGGAGAGTACGTCGGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTC
GGACACGGAAGGTTTTCTTCTTGGGGAAGTAAAAGGTGAAGCCAAGAACAGCATTACTGATTCCCAAATGGATGATGTTG
AAGTTGTTTATACAATTGACATTCAGAAATATATTCCATGCTATCAGCTTTTTAGCTTTTATAATTCTTCAGGCGAAGTA
AATGAGCAAGCACTGAAGAAAATATTATCAAATGTCAAAAAGAATGTGGTAGGTTGGTACAAATTCCGTCGTCATTCAGA
TCAGATCATGACGTTTAGAGAGAGGCTGCTTCACAAAAACTTGCAGGAGCATTTTTCAAACCAAGACCTTGTTTTTCTGC
TATTAACACCAAGTATAATAACAGAAAGCTGCTCTACTCATCGACTGGAACATTCCTTATATAAACCTCAAAAAGGACTT
TTTCACAGGGTACCTTTAGTGGTTGCCAATCTGGGCATGTCTGAACAACTGGGTTATAAAACTGTATCAGGTTCCTGTAT
GTCCACTGGTTTTAGCCGAGCAGTACAAACACACAGCTCTAAATTTTTTGAAGAAGATGGATCCTTAAAGGAGGTACATA
AGATAAATGAAATGTATGCTTCATTACAAGAGGAATTAAAGAGTATATGCAAAAAAGTGGAAGACAGTGAACAAGCAGTA
GATAAACTAGTAAAGGATGTAAACAGATTAAAACGAGAAATTGAGAAAAGGAGAGGAGCACAGATTCAGGCAGCAAGAGA
GAAGAACATCCAAAAAGACCCTCAGGAGAACATTTTTCTTTGTCAGGCATTACGGACCTTTTTTCCAAATTCTGAATTTC
TTCATTCATGTGTTATGTCTTTAAAAAATAGACATGTTTCTAAAAGTAGCTGTAACTACAACCACCATCTCGATGTAGTA
GACAATCTGACCTTAATGGTAGAACACACTGACATTCCTGAAGCTAGTCCAGCTAGTACACCACAAATCATTAAGCATAA
AGCCTTAGACTTAGATGACAGATGGCAATTCAAGAGATCTCGGTTGTTAGATACACAAGACAAACGATCTAAAGCAGATA
CTGGTAGTAGTAACCAAGATAAAGCATCCAAAATGAGCAGCCCAGAAACAGATGAAGAAATTGAAAAGATGAAGGGTTTT
GGTGAATATTCACGGTCTCCTACATTTTGA

Library Parental gene expression (RPM)
bodymap2_liver 0 .63 RPM
bodymap2_lung 5 .13 RPM
bodymap2_breast 9 .42 RPM
bodymap2_adipose 16 .08 RPM
bodymap2_adrenal 11 .89 RPM
bodymap2_skeletal_muscle 18 .52 RPM
bodymap2_thyroid 16 .42 RPM
bodymap2_prostate 14 .79 RPM
bodymap2_colon 13 .79 RPM
bodymap2_testis 27 .81 RPM
bodymap2_brain 3 .75 RPM
bodymap2_heart 4 .60 RPM
bodymap2_white_blood_cells 21 .20 RPM
bodymap2_lymph_node 8 .39 RPM
bodymap2_ovary 25 .77 RPM
bodymap2_kidney 6 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013241 ortholog_one2one 1 retrogene
retro_chof_2580,
Macaca mulatta ENSMMUG00000015357 ortholog_one2one 2 retrogenes
retro_mmul_1499, retro_mmul_2320,
Nomascus leucogenys ENSNLEG00000009133 ortholog_one2one 2 retrogenes
retro_nleu_1198, retro_nleu_661,
Pongo abelii ENSPPYG00000014898 ortholog_one2one 2 retrogenes
retro_pabe_2208, retro_pabe_3301,
Pan troglodytes ENSPTRG00000023645 ortholog_one2one 2 retrogenes
retro_ptro_1911, retro_ptro_2728,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4024 88.44 77.26
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Download FASTA sequences of all ENSG00000163322 retrocopies