Parental gene: | FAM175A, ENSPPYG00000014898 |
| Aliases: | None |
| Description: | family with sequence similarity 175, member A [Source:HGNC Symbol;Acc:25829] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 4:87066757..87099028(-) |
>ENSPPYG00000014898
ATGGAGGGGGAGAGTACGTCGGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCCTTCCAGCACCTCAACACGGACTC
GGACACGGAAGGTTTTCTTCTTGGGGAAGTAAAAGGTGAAGCCAAGAACAGCATTACTGATTCTCAAATGGATGATGTTG
AAGTTGTTTATACAATTGACATTCAGAAATATATTCCATGCTATCAGCTTTTTAGCTTTTATAATTCTTCAGGTGAAGTA
AATGAGCAAGCACTGAAGAAAATATTATCAAATGTCAAAAAGAATGTGGTAGGTTGGTACAAATTCCGTCGTCATTCAGA
TCAGATCATGACGTTTAGAGAGAGGCTGCTTCACAAAAACTTGCAGGAGCATTTTTCAAACCAAGACCTTGTTTTTCTGC
TATTAACACCAAGTATAATAACAGAAAGCTGCTCTACTCATCGACTGGAACATTCCTTATATAAACCTCAAAAAGGACTT
TTTCACAGGGTACCTTTAGTGGTTGCCAATCTGGGCATGTCTGAACAACTGGGTTATAAAACTGTATCAGGTTCCTGTAT
GTCCACTGGTTTTAGCCGAGCAGTACAAACACACAGCTCTAAATTTTTTGAAGAAGATGGATCCTTAAAGGAGGTACATA
AGATAAATGAAATGTATGCTTCATTACAAGAGGAATTAAAGAGTATATGCAAAAAAGTGGAAGACAGTGAACAAGCAGTA
GATAAACTAGTAAAGGATGTAAACAGATTAAAACGAGAAATTGAGAAAAGGAGAGGAGCACAGATTCAGGCAGCAAGAGA
GAAGAACATCCAAAAAGACCCTCAGGAGAACATTTTTCTTTGTCAAGCATTACGGACCTTTTTTCCAAATTCTGAATTTC
TTCATTCGTGTGTTATGTCTTTAAAAAATAGACATGTTTCTAAAAGTAGCTGTAACTACAACCACCATCTCGATGTAGTA
GACAATCTGACCTTAATGGTAGAACACACTGACATTCCTGAAGCTAGTCCAGCTAGTACACCACAAATCATTAAGCATAA
AGCCTTAGACTTAGATGACAGATGGCAATTCAAGAGATCACGGTTGTTAGATACACAAGACAAACGATCTAAAACAGATA
CTGATAGTAGTAACCAAGATAAAGCGTCCAAAATGAGCAGCCCAGAAACAGATGAAGAAATTGAAAAGATGAAGGGTTTT
GGTGAATATTCACGGTCTCCTACATTTTGA
ATGGAGGGGGAGAGTACGTCGGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCCTTCCAGCACCTCAACACGGACTC
GGACACGGAAGGTTTTCTTCTTGGGGAAGTAAAAGGTGAAGCCAAGAACAGCATTACTGATTCTCAAATGGATGATGTTG
AAGTTGTTTATACAATTGACATTCAGAAATATATTCCATGCTATCAGCTTTTTAGCTTTTATAATTCTTCAGGTGAAGTA
AATGAGCAAGCACTGAAGAAAATATTATCAAATGTCAAAAAGAATGTGGTAGGTTGGTACAAATTCCGTCGTCATTCAGA
TCAGATCATGACGTTTAGAGAGAGGCTGCTTCACAAAAACTTGCAGGAGCATTTTTCAAACCAAGACCTTGTTTTTCTGC
TATTAACACCAAGTATAATAACAGAAAGCTGCTCTACTCATCGACTGGAACATTCCTTATATAAACCTCAAAAAGGACTT
TTTCACAGGGTACCTTTAGTGGTTGCCAATCTGGGCATGTCTGAACAACTGGGTTATAAAACTGTATCAGGTTCCTGTAT
GTCCACTGGTTTTAGCCGAGCAGTACAAACACACAGCTCTAAATTTTTTGAAGAAGATGGATCCTTAAAGGAGGTACATA
AGATAAATGAAATGTATGCTTCATTACAAGAGGAATTAAAGAGTATATGCAAAAAAGTGGAAGACAGTGAACAAGCAGTA
GATAAACTAGTAAAGGATGTAAACAGATTAAAACGAGAAATTGAGAAAAGGAGAGGAGCACAGATTCAGGCAGCAAGAGA
GAAGAACATCCAAAAAGACCCTCAGGAGAACATTTTTCTTTGTCAAGCATTACGGACCTTTTTTCCAAATTCTGAATTTC
TTCATTCGTGTGTTATGTCTTTAAAAAATAGACATGTTTCTAAAAGTAGCTGTAACTACAACCACCATCTCGATGTAGTA
GACAATCTGACCTTAATGGTAGAACACACTGACATTCCTGAAGCTAGTCCAGCTAGTACACCACAAATCATTAAGCATAA
AGCCTTAGACTTAGATGACAGATGGCAATTCAAGAGATCACGGTTGTTAGATACACAAGACAAACGATCTAAAACAGATA
CTGATAGTAGTAACCAAGATAAAGCGTCCAAAATGAGCAGCCCAGAAACAGATGAAGAAATTGAAAAGATGAAGGGTTTT
GGTGAATATTCACGGTCTCCTACATTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .15 RPM |
| SRP007412_cerebellum | 7 .17 RPM |
| SRP007412_heart | 2 .95 RPM |
| SRP007412_kidney | 5 .80 RPM |
| SRP007412_liver | 3 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013241 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000163322 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015357 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009133 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000023645 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2208 | 77.94 | 96.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3301 | 89.21 | 67.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014898 retrocopies