Parental gene: | RPL27A, ENSG00000166441 |
| Aliases: | RPL27A, L27A |
| Description: | ribosomal protein L27a [Source:HGNC Symbol;Acc:10329] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:8703957..8736306(+) |
>ENSG00000166441
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTAGGGGCCACGTGAGCCACGGCCACGGCCGCATAGGCAAGCACCGGAA
GCACCCCGGCGGCCGCGGTAATGCTGGTGGTCTGCATCACCACCGGATCAACTTCGACAAATACCACCCAGGCTACTTTG
GGAAAGTTGGTATGAAGCATTACCACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGACAAATTGTGGACT
TTGGTCAGTGAACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTGCTCCCATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGAAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGAGTGTTGGGGGGGCCTGTGTCCTGGTGGCTTGA
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTAGGGGCCACGTGAGCCACGGCCACGGCCGCATAGGCAAGCACCGGAA
GCACCCCGGCGGCCGCGGTAATGCTGGTGGTCTGCATCACCACCGGATCAACTTCGACAAATACCACCCAGGCTACTTTG
GGAAAGTTGGTATGAAGCATTACCACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGACAAATTGTGGACT
TTGGTCAGTGAACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTGCTCCCATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGAAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGAGTGTTGGGGGGGCCTGTGTCCTGGTGGCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 187 .33 RPM |
| bodymap2_lung | 563 .40 RPM |
| bodymap2_breast | 309 .93 RPM |
| bodymap2_adipose | 407 .04 RPM |
| bodymap2_adrenal | 683 .19 RPM |
| bodymap2_skeletal_muscle | 291 .64 RPM |
| bodymap2_thyroid | 324 .56 RPM |
| bodymap2_prostate | 586 .75 RPM |
| bodymap2_colon | 485 .08 RPM |
| bodymap2_testis | 232 .16 RPM |
| bodymap2_brain | 103 .14 RPM |
| bodymap2_heart | 123 .73 RPM |
| bodymap2_white_blood_cells | 719 .98 RPM |
| bodymap2_lymph_node | 575 .42 RPM |
| bodymap2_ovary | 534 .80 RPM |
| bodymap2_kidney | 179 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000001660 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016616 | possible_ortholog | 7 retrogenes | |
| Macaca mulatta | ENSMMUG00000021828 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000046364 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003333 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014214 | possible_ortholog | 10 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013207 | ortholog_one2one | 16 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_239 | 73.48 | 89.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1263 | 74.34 | 75.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1908 | 74.23 | 87.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2352 | 80.33 | 81.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3335 | 82.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3586 | 69.50 | 93.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_3682 | 97.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000166441 retrocopies