RetrogeneDB ID: | retro_tsyr_1725 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_55975:5574..5924(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27A | ||
Ensembl ID: | ENSTSYG00000013207 | ||
Aliases: | None | ||
Description: | ribosomal protein L27a [Source:HGNC Symbol;Acc:10329] |
Percent Identity: | 60.66 % |
Parental protein coverage: | 81.76 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | GKHRKHPGGRGNAGG-LHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAA |
GK....PGG...AG...HHH.INF.K.HPGYFGKVG..H.HLKRNQSFCP.V.L.KL.T....QT.V... | |
Retrocopy | GKY*NYPGGQ--AGA<MHHHKINFSKCHPGYFGKVGIGHFHLKRNQSFCPAVHLNKL*TWGNGQTQVMLI |
Parental | KNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGA |
K..T...PI.DVVRSG.Y.V.G...LP.QPVI.KAKFF.R.A.EKIK.V..A | |
Retrocopy | KTRT--SPITDVVRSGFYRVPGMRRLPEQPVIMKAKFFNRIAHEKIKIVSVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |