RetrogeneDB ID: | retro_tsyr_608 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_14885:21090..21390(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27A | ||
Ensembl ID: | ENSTSYG00000013207 | ||
Aliases: | None | ||
Description: | ribosomal protein L27a [Source:HGNC Symbol;Acc:10329] |
Percent Identity: | 75.49 % |
Parental protein coverage: | 67.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | GKHRKHPGGR-GNAGGLHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAA |
GK...H.GG...NAGG.HHH.INF.KYHPGYF...GM...HLKR.QSFCPTVNLDKLW.LVSEQT.V.AA | |
Retrocopy | GKNPTHLGGS>NNAGGVHHHSINFEKYHPGYFRNTGMSYDHLKRKQSFCPTVNLDKLWALVSEQTSVSAA |
Parental | KNKTGAAPIIDVVRSGYYKVL-GKGKLPKQPV |
K.KTG.APIIDVV.SGYYKVL.G.GKLPKQPV | |
Retrocopy | KSKTGVAPIIDVVQSGYYKVL<GRGKLPKQPV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |