Parental gene: | CDK2AP2, ENSG00000167797 |
| Aliases: | CDK2AP2, DOC-1R, p14 |
| Description: | cyclin-dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:30833] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:67273967..67276120(-) |
>ENSG00000167797
ATGTCCTACAAACCCATCGCCCCTGCTCCCAGCAGCACCCCTGGCTCCAGCACCCCTGGGCCGGGCACCCCGGTCCCTAC
AGGAAGCGTCCCGTCGCCGTCGGGCTCAGTGCCAGGAGCCGGCGCTCCTTTCAGACCGCTGTTTAACGACTTTGGACCGC
CTTCCATGGGCTACGTGCAGGCGATGAAGCCACCCGGCGCCCAGGGCTCCCAGAGCACCTACACGGACCTGCTGTCAGTC
ATAGAGGAGATGGGCAAAGAGATCCGGCCTACCTATGCTGGCAGCAAGAGCGCCATGGAGCGCCTGAAGAGAGGTATCAT
CCATGCCCGGGCCCTAGTCAGAGAGTGCCTGGCAGAGACAGAGCGGAACGCCCGCACGTAA
ATGTCCTACAAACCCATCGCCCCTGCTCCCAGCAGCACCCCTGGCTCCAGCACCCCTGGGCCGGGCACCCCGGTCCCTAC
AGGAAGCGTCCCGTCGCCGTCGGGCTCAGTGCCAGGAGCCGGCGCTCCTTTCAGACCGCTGTTTAACGACTTTGGACCGC
CTTCCATGGGCTACGTGCAGGCGATGAAGCCACCCGGCGCCCAGGGCTCCCAGAGCACCTACACGGACCTGCTGTCAGTC
ATAGAGGAGATGGGCAAAGAGATCCGGCCTACCTATGCTGGCAGCAAGAGCGCCATGGAGCGCCTGAAGAGAGGTATCAT
CCATGCCCGGGCCCTAGTCAGAGAGTGCCTGGCAGAGACAGAGCGGAACGCCCGCACGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 24 .86 RPM |
| bodymap2_lung | 30 .24 RPM |
| bodymap2_breast | 11 .93 RPM |
| bodymap2_adipose | 16 .24 RPM |
| bodymap2_adrenal | 12 .36 RPM |
| bodymap2_skeletal_muscle | 9 .73 RPM |
| bodymap2_thyroid | 11 .94 RPM |
| bodymap2_prostate | 25 .27 RPM |
| bodymap2_colon | 30 .26 RPM |
| bodymap2_testis | 19 .38 RPM |
| bodymap2_brain | 3 .33 RPM |
| bodymap2_heart | 9 .34 RPM |
| bodymap2_white_blood_cells | 36 .88 RPM |
| bodymap2_lymph_node | 41 .17 RPM |
| bodymap2_ovary | 14 .80 RPM |
| bodymap2_kidney | 63 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000011370 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000020079 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000006428 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000111328 | within_species_paralog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010159 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000011827 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006438 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008275 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003966 | ortholog_one2one | 9 retrogenes | |
| Tupaia belangeri | ENSTBEG00000005476 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3699 | 88.89 | 77.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4172 | 84.26 | 85.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4176 | 85.19 | 85.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4268 | 83.33 | 85.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000167797 retrocopies