Parental gene: | RNF181, ENSG00000168894 |
| Aliases: | None |
| Description: | ring finger protein 181 [Source:HGNC Symbol;Acc:28037] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:85822847..85824736(+) |
>ENSG00000168894
ATGGCGTCCTATTTCGATGAACACGACTGCGAGCCGTCGGACCCTGAGCAGGAGACGCGAACCAACATGCTGCTGGAGCT
CGCAAGGTCACTTTTCAATAGGATGGACTTTGAAGACTTGGGGTTGGTAGTAGATTGGGACCACCACCTGCCTCCACCAG
CTGCCAAGACTGTGGTTGAGAACCTCCCCAGGACAGTCATCAGAGGCTCTCAGGCTGAGCTCAAGTGCCCCGTGTGTCTT
TTGGAATTTGAGGAGGAGGAGACTGCCATTGAGATGCCTTGCCATCACCTTTTCCATTCCAGCTGCATTCTGCCCTGGCT
AAGCAAGACAAATTCCTGTCCCTTGTGCCGCTATGAGCTGCCCACTGATGACGACACTTATGAGGAGCACAGACGAGATA
AGGCTCGAAAACAGCAGCAGCAACACCGACTGGAGAACCTCCATGGAGCCATGTACACGTGA
ATGGCGTCCTATTTCGATGAACACGACTGCGAGCCGTCGGACCCTGAGCAGGAGACGCGAACCAACATGCTGCTGGAGCT
CGCAAGGTCACTTTTCAATAGGATGGACTTTGAAGACTTGGGGTTGGTAGTAGATTGGGACCACCACCTGCCTCCACCAG
CTGCCAAGACTGTGGTTGAGAACCTCCCCAGGACAGTCATCAGAGGCTCTCAGGCTGAGCTCAAGTGCCCCGTGTGTCTT
TTGGAATTTGAGGAGGAGGAGACTGCCATTGAGATGCCTTGCCATCACCTTTTCCATTCCAGCTGCATTCTGCCCTGGCT
AAGCAAGACAAATTCCTGTCCCTTGTGCCGCTATGAGCTGCCCACTGATGACGACACTTATGAGGAGCACAGACGAGATA
AGGCTCGAAAACAGCAGCAGCAACACCGACTGGAGAACCTCCATGGAGCCATGTACACGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 33 .19 RPM |
| bodymap2_lung | 45 .85 RPM |
| bodymap2_breast | 26 .93 RPM |
| bodymap2_adipose | 28 .07 RPM |
| bodymap2_adrenal | 31 .36 RPM |
| bodymap2_skeletal_muscle | 31 .97 RPM |
| bodymap2_thyroid | 27 .59 RPM |
| bodymap2_prostate | 36 .48 RPM |
| bodymap2_colon | 19 .78 RPM |
| bodymap2_testis | 30 .09 RPM |
| bodymap2_brain | 15 .78 RPM |
| bodymap2_heart | 15 .03 RPM |
| bodymap2_white_blood_cells | 35 .95 RPM |
| bodymap2_lymph_node | 27 .12 RPM |
| bodymap2_ovary | 18 .00 RPM |
| bodymap2_kidney | 29 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019647 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000070423 | within_species_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017824 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000012225 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012138 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_938 | 65.58 | 98.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1005 | 64.29 | 52.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_3771 | 86.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000168894 retrocopies