Parental gene: | EIF3K, ENSG00000178982 |
| Aliases: | EIF3K, EIF3-p28, EIF3S12, HSPC029, M9, MSTP001, PLAC-24, PLAC24, PRO1474, PTD001 |
| Description: | eukaryotic translation initiation factor 3, subunit K [Source:HGNC Symbol;Acc:24656] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:39109734..39127595(+) |
>ENSG00000178982
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACCGCCCAGATCCTGCTGAAGGCCCTCACCAACTTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTCGGGGA
CCTGCTGGAGACCTGCCATTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATTGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCGGACAGCCAGCTAAAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGAT
CTTCATCTGTAGCCAAGAAGAGAGCATTAAACCCAAGAACATTGTGGAGAAGATTGACTTTGACAGTGTGTCCAGCATCA
TGGCCTCCTCCCAGTAA
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACCGCCCAGATCCTGCTGAAGGCCCTCACCAACTTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTCGGGGA
CCTGCTGGAGACCTGCCATTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATTGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCGGACAGCCAGCTAAAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGAT
CTTCATCTGTAGCCAAGAAGAGAGCATTAAACCCAAGAACATTGTGGAGAAGATTGACTTTGACAGTGTGTCCAGCATCA
TGGCCTCCTCCCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 59 .42 RPM |
| bodymap2_lung | 96 .92 RPM |
| bodymap2_breast | 98 .35 RPM |
| bodymap2_adipose | 83 .71 RPM |
| bodymap2_adrenal | 105 .01 RPM |
| bodymap2_skeletal_muscle | 119 .53 RPM |
| bodymap2_thyroid | 69 .17 RPM |
| bodymap2_prostate | 154 .32 RPM |
| bodymap2_colon | 100 .64 RPM |
| bodymap2_testis | 50 .81 RPM |
| bodymap2_brain | 48 .61 RPM |
| bodymap2_heart | 122 .05 RPM |
| bodymap2_white_blood_cells | 148 .49 RPM |
| bodymap2_lymph_node | 101 .75 RPM |
| bodymap2_ovary | 77 .22 RPM |
| bodymap2_kidney | 110 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000007594 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016808 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010217 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000028767 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000013314 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026260 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025857 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000010934 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005313 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007001 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2616 | 74.81 | 70.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3224 | 80.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000178982 retrocopies