Parental gene:

EIF3K, ENSPTRG00000010934

Aliases:EIF3K, EIF3S12
Description:Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/TrEMBL;Acc:H2QG88]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:19:43829079..43846373(+)


>ENSPTRG00000010934
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACTGCCCAGATCCTGCTGAAGGCCCTCACCAACTTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTCGGGGA
CCTGCTGGAGACCTGCCATTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATTGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCGGACAGCCAGCTAAAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGAT
CTTCATCTGTAGCCAAGAAGAGAGCATTAAACCCAAGAACATTGTGGAGAAGATTGACTTTGACAGTGTGTCCAGCATCA
TGGCCTCCTCCCAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 76 .43 RPM
SRP007412_cerebellum 52 .70 RPM
SRP007412_heart 40 .43 RPM
SRP007412_kidney 105 .10 RPM
SRP007412_liver 58 .95 RPM
SRP007412_testis 30 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000007594 ortholog_one2many 3 retrogenes
retro_etel_1653, retro_etel_1868, retro_etel_5,
Homo sapiens ENSG00000178982 ortholog_one2one 2 retrogenes
retro_hsap_2616, retro_hsap_3224,
Gorilla gorilla ENSGGOG00000016808 ortholog_one2one 1 retrogene
retro_ggor_2192,
Myotis lucifugus ENSMLUG00000010217 ortholog_one2one 1 retrogene
retro_mluc_645,
Macaca mulatta ENSMMUG00000028767 ortholog_one2one 2 retrogenes
retro_mmul_1478, retro_mmul_2029,
Monodelphis domestica ENSMODG00000013314 ortholog_one2one 3 retrogenes
retro_mdom_1235, retro_mdom_1929, retro_mdom_781,
Otolemur garnettii ENSOGAG00000026260 ortholog_one2one 1 retrogene
retro_ogar_413,
Pongo abelii ENSPPYG00000025857 ortholog_one2one 4 retrogenes
retro_pabe_2342, retro_pabe_2555, retro_pabe_2610, retro_pabe_2673,
Sarcophilus harrisii ENSSHAG00000005313 ortholog_one2one 1 retrogene
retro_shar_689,
Tarsius syrichta ENSTSYG00000007001 ortholog_one2one 1 retrogene
retro_tsyr_1964,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1763 75.56 61.93
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2. retro_ptro_2176 80.37 100.00
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Download FASTA sequences of all ENSPTRG00000010934 retrocopies