Parental gene: | TMA7, ENSG00000232112 |
| Aliases: | TMA7, CCDC72 |
| Description: | translation machinery associated 7 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26932] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 3:48481666..48485616(+) |
>ENSG00000232112
ATGTCCGGCCGCGAAGGTGGCAAGAAGAAGCCACTGAAACAGCCCAAGAAGCAGGCCAAGGAGATGGACGAGGAAGATAA
GGCTTTCAAGCAGAAACAAAAAGAGGAGCAGAAGAAACTCGAGGAGCTAAAAGCGAAGGCCGCGGGGAAGGGGCCCTTGG
CCACAGGTGGAATTAAGAAATCTGGCAAAAAGTAA
ATGTCCGGCCGCGAAGGTGGCAAGAAGAAGCCACTGAAACAGCCCAAGAAGCAGGCCAAGGAGATGGACGAGGAAGATAA
GGCTTTCAAGCAGAAACAAAAAGAGGAGCAGAAGAAACTCGAGGAGCTAAAAGCGAAGGCCGCGGGGAAGGGGCCCTTGG
CCACAGGTGGAATTAAGAAATCTGGCAAAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 30 .02 RPM |
| bodymap2_lung | 54 .83 RPM |
| bodymap2_breast | 47 .61 RPM |
| bodymap2_adipose | 31 .75 RPM |
| bodymap2_adrenal | 53 .65 RPM |
| bodymap2_skeletal_muscle | 27 .97 RPM |
| bodymap2_thyroid | 58 .41 RPM |
| bodymap2_prostate | 53 .54 RPM |
| bodymap2_colon | 40 .51 RPM |
| bodymap2_testis | 68 .32 RPM |
| bodymap2_brain | 51 .71 RPM |
| bodymap2_heart | 28 .28 RPM |
| bodymap2_white_blood_cells | 62 .96 RPM |
| bodymap2_lymph_node | 52 .68 RPM |
| bodymap2_ovary | 49 .16 RPM |
| bodymap2_kidney | 36 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001193 | ortholog_one2one | 6 retrogenes | |
| Felis catus | ENSFCAG00000026902 | ortholog_one2many | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028044 | possible_ortholog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000042689 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000047225 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011351 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_131 | 95.31 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_154 | 89.23 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2151 | 67.19 | 98.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2561 | 89.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_2888 | 85.94 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_2934 | 69.49 | 90.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_3115 | 75.47 | 81.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_3402 | 95.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_3736 | 82.81 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_3852 | 84.38 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_hsap_3964 | 78.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000232112 retrocopies