Parental gene:

GATC, ENSG00000257218

Aliases:None
Description:glutamyl-tRNA(Gln) amidotransferase, subunit C [Source:HGNC Symbol;Acc:25068]
Organism:Human (Homo sapiens)
Coordinates:12:120884240..120899389(+)


>ENSG00000257218
ATGTGGTCGCGGTTGGTGTGGCTGGGCCTTCGGGCCCCTCTGGGCGGGCGCCAGGGCTTCACCTCCAAGGCGGATCCTCA
GGGCAGTGGCCGGATCACGGCTGCGGTGATCGAGCACCTGGAGCGTCTAGCGCTTGTGGACTTCGGCAGCCGCGAGGCAG
TGGCGCGACTGGAGAAAGCTATCGCCTTCGCCGACCGGCTACGCGCCGTGGACACAGACGGGGTGGAGCCCATGGAATCG
GTCCTGGAGGACAGATGTCTATACCTGAGATCCGACAATGTGGTAGAAGGCAACTGTGCTGATGAATTACTACAAAACTC
CCATCGCGTCGTGGAGGAGTACTTTGTGGCCCCCCCAGGTAATATCTCTTTGCCAAAGCTGGATGAACAAGAGCCATTCC
CACACAGCTGA

Library Parental gene expression (RPM)
bodymap2_liver 7 .39 RPM
bodymap2_lung 10 .43 RPM
bodymap2_breast 12 .14 RPM
bodymap2_adipose 13 .60 RPM
bodymap2_adrenal 11 .59 RPM
bodymap2_skeletal_muscle 6 .15 RPM
bodymap2_thyroid 13 .82 RPM
bodymap2_prostate 12 .45 RPM
bodymap2_colon 16 .26 RPM
bodymap2_testis 7 .58 RPM
bodymap2_brain 15 .10 RPM
bodymap2_heart 5 .98 RPM
bodymap2_white_blood_cells 14 .35 RPM
bodymap2_lymph_node 22 .48 RPM
bodymap2_ovary 14 .28 RPM
bodymap2_kidney 13 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013298 ortholog_one2many 1 retrogene
retro_amel_1364,
Equus caballus ENSECAG00000011118 ortholog_one2many 1 retrogene
retro_ecab_462,
Felis catus ENSFCAG00000024015 ortholog_one2many 1 retrogene
retro_fcat_1279,
Nomascus leucogenys ENSNLEG00000015651 ortholog_one2many 1 retrogene
retro_nleu_1140,
Oryctolagus cuniculus ENSOCUG00000009867 ortholog_one2many 2 retrogenes
retro_ocun_585, retro_ocun_858,
Ochotona princeps ENSOPRG00000004226 ortholog_one2many 1 retrogene
retro_opri_1008,
Pongo abelii ENSPPYG00000005030 ortholog_one2many 1 retrogene
retro_pabe_3181,
Pan troglodytes ENSPTRG00000005534 ortholog_one2many 1 retrogene
retro_ptro_2655,
Sus scrofa ENSSSCG00000009907 ortholog_one2many 1 retrogene
retro_sscr_746,
Tarsius syrichta ENSTSYG00000006845 possible_ortholog 1 retrogene
retro_tsyr_1219,
Tursiops truncatus ENSTTRG00000000144 ortholog_one2many 1 retrogene
retro_ttru_1695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3902 72.00 90.44
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Download FASTA sequences of all ENSG00000257218 retrocopies