Parental gene:

TOMM40, ENSGGOG00000023033

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:19:42099840..42111873(+)


>ENSGGOG00000023033
GGGGCCGCCGAGGATGGGGCCTGCGGCTGCCTGCCCAACCCGGGCACATTCGAGGAGTGCCACCGGAAGTGCAAGGAGCT
GTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAAAGGGTTGAGTAACCATTTCCAGGTGAACCACACAGTAG
CCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCACGTATGTGGGGACAAAGCAGCTGAGTCCCACAGAGGCG
TTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTCAACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAG
GTCCAAGATGGCCATCCAGTGGAGGGACACAGGAACACAGACTTGGACCTCAGTGCAGCAAGTCCCAGCCACAGCGCTGA
CCTCAGCGGTAGGGAACCCCTGGTCGATGGGAATCCTCGTAGCCCACTACCTCCAGAGCATCACGCCTTGCCTGGCCCTG
GGTGGAGAGCTGGTCTACCACCGGCGGCCTGGAGAGGAGGGCACTGTCATGTCTCTAGCTGGGAAATACACATTGAACAA
CTGGTTGGCAACGGTAACGTTGGGCCAGGCGGGCATGCACGCAACATACTACCACAAAGCCAGTGACCAGCTGCAGGTGG
GTGTGGAGTTTGAGGCCAGCACAAGGATGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGACCTGCCAAAGGCCAAC
CTTCTCTTTAAAGGCTCTGTGGATAGCAACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCCGCCCCTGCCCCTGAC
ACTGGCCCTTGGGGCCTTCCTGAATCACCGCAAGAACAAGTTCCAGTGTGGCTTTGGCCTCACCATCGGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 22 .68 RPM
SRP007412_cerebellum 16 .27 RPM
SRP007412_heart 11 .76 RPM
SRP007412_kidney 13 .13 RPM
SRP007412_liver 8 .41 RPM
SRP007412_testis 10 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000005720 within_species_paralog 2 retrogenes
retro_ggor_1075, retro_ggor_1761,
Microcebus murinus ENSMICG00000014041 ortholog_one2one 1 retrogene
retro_mmur_420,
Myotis lucifugus ENSMLUG00000028928 ortholog_one2one 1 retrogene
retro_mluc_697,
Nomascus leucogenys ENSNLEG00000001726 ortholog_one2one 2 retrogenes
retro_nleu_2368, retro_nleu_2542,
Oryctolagus cuniculus ENSOCUG00000023582 ortholog_one2one 1 retrogene
retro_ocun_1143,
Pongo abelii ENSPPYG00000025858 ortholog_one2one 1 retrogene
retro_pabe_174,
Pan troglodytes ENSPTRG00000011126 ortholog_one2many 1 retrogene
retro_ptro_39,
Ictidomys tridecemlineatus ENSSTOG00000009019 ortholog_one2many 1 retrogene
retro_itri_150,
Drosophila melanogaster FBgn0016041 ortholog_many2many 1 retrogene
retro_dmel_74,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1356 74.00 67.24
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Download FASTA sequences of all ENSGGOG00000023033 retrocopies