Parental gene: | ENSPPYG00000025858 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:46130190..46143430(+) |
>ENSPPYG00000025858
ATGGGGAACGTGTTGGCCGCCAGCTCGCCGCCCGCAGGGCCGCCACCGCCGCCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCAGCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTGGGAGGCTATCGGGGCGCCGGCACCAGTACGAGTCGAGGTT
CGGAACGGACCCCCGGGGCTGCAACCGCCAGCACCTCAGGGGCCGCCGAGGATGGGGCCTGCGGCTGCCTGCCCAACCCG
GGCACGTTCGAGGAGTGCCACGGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAA
AGGGTTGAGTAACCATTTCCAGGTGAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CGTATGTGGGGACAAAGCAGCTAAGTCCCACAGAGGCGTTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGACGGCGAGTATCGGGGCTCTGACTTCACAGTAGCCGTCACCCTGGGGAACCCAGATGTCCTCGTGGGTT
CAGGAATCCTCGTAGCCCACTACCTCCAGAGCATCACGCCTTGCCTGGCCCTGGGCGGAGAGCTGGTCTACCACCGGCGG
CCTGGAGAGGAGGGCACTGTCATGTCTCTAGCTGGGAAATACACACTGAACAACTGGTTGGCAACGGTAACGTTGGGCCA
GGCGGGCATGCACGCAACGTACTACCACAAAGCCAGTGACCAGCTGCAGGTGGGTGTGGAGTTTGAGGCCAGCACAAGGA
TGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGACCTGCCTAAGGCCAACCTCCTCTTCAAAGGCTCTGTGGATAGC
AACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCCGCCCCTGCCCCTGACACTGGCCCTTGGGGCCTTCCTGAATCA
CCGCAAGAACAAGTTCCAGTGTGGCTTTGGCCTCACCATCGGCTGA
ATGGGGAACGTGTTGGCCGCCAGCTCGCCGCCCGCAGGGCCGCCACCGCCGCCTGCGCCGGCCCTCGTGGGGCTGCCGCC
ACCTCCAGCCTCGCCGCCGGGCTTCACGCTGCCGCCGCTGGGAGGCTATCGGGGCGCCGGCACCAGTACGAGTCGAGGTT
CGGAACGGACCCCCGGGGCTGCAACCGCCAGCACCTCAGGGGCCGCCGAGGATGGGGCCTGCGGCTGCCTGCCCAACCCG
GGCACGTTCGAGGAGTGCCACGGGAAGTGCAAGGAGCTGTTTCCCATTCAGATGGAGGGTGTCAAGCTCACAGTCAACAA
AGGGTTGAGTAACCATTTCCAGGTGAACCACACAGTAGCCCTCAGCACAATCGGGGAGTCCAACTACCACTTCGGGGTCA
CGTATGTGGGGACAAAGCAGCTAAGTCCCACAGAGGCGTTCCCTGTACTGGTGGGTGACATGGACAACAGTGGCAGTCTC
AACGCTCAGGTCATTCACCAGCTGGGCCCCGGTCTCAGGTCCAAGATGGCCATCCAGACCCAGCAGTCGAAGTTTGTGAA
CTGGCAGGTGGACGGCGAGTATCGGGGCTCTGACTTCACAGTAGCCGTCACCCTGGGGAACCCAGATGTCCTCGTGGGTT
CAGGAATCCTCGTAGCCCACTACCTCCAGAGCATCACGCCTTGCCTGGCCCTGGGCGGAGAGCTGGTCTACCACCGGCGG
CCTGGAGAGGAGGGCACTGTCATGTCTCTAGCTGGGAAATACACACTGAACAACTGGTTGGCAACGGTAACGTTGGGCCA
GGCGGGCATGCACGCAACGTACTACCACAAAGCCAGTGACCAGCTGCAGGTGGGTGTGGAGTTTGAGGCCAGCACAAGGA
TGCAGGACACCAGCGTCTCCTTCGGGTACCAGCTGGACCTGCCTAAGGCCAACCTCCTCTTCAAAGGCTCTGTGGATAGC
AACTGGATCGTGGGTGCCACGCTGGAGAAGAAGCTCCCGCCCCTGCCCCTGACACTGGCCCTTGGGGCCTTCCTGAATCA
CCGCAAGAACAAGTTCCAGTGTGGCTTTGGCCTCACCATCGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .08 RPM |
| SRP007412_cerebellum | 9 .97 RPM |
| SRP007412_heart | 3 .85 RPM |
| SRP007412_kidney | 14 .62 RPM |
| SRP007412_liver | 9 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000023033 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000014041 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000028928 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014303 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001726 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000023582 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011126 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009019 | ortholog_many2many | 1 retrogene | |
| Drosophila melanogaster | FBgn0016041 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_174 | 96.68 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025858 retrocopies