Parental gene:

RPL9, ENSMICG00000016778

Aliases:None
Description:ribosomal protein L9 [Source:HGNC Symbol;Acc:10369]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_2847:362368..365915(-)


>ENSMICG00000016778
ATGAAGACCATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTGGACATCACTCTTAAGGGACGTACAGTTATCGT
GAAGGGTCCCAGAGGAACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTTAGTCTCCTTGGAAAGAAAAAGAAGA
GGCTCCGGGTTGACAAATGGTGGGGAAATAGAAAGGAACTGGCTACTGTTCGCACTATTTGTAGTCATGTACAGAATATG
ATCAAGGGTGTCACACTGGGTTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAATGTTGTTATCCAGGA
GAATGGGTCTCTTGTTGAAATACGGAATTTCTTAGGTGAAAAATACATCCGCAGGGTTCGGATGAGGCCAGGTGTTGCTT
GTTCAGTATCTCAAGCACAGAAAGATGAGTTGATCCTCGAAGGAAATGACATTGAGCTTGTTTCAAATTCGGCTGCATTG
ATTCAGCAGGCCACAACAGTTAAAAACAAGGATATCAGAAAATTTTTGGATGGTATCTATGTCTCTGAAAAAGGAACAGT
TCAGCAGGCTGATGAATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007317 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000003187 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000014518 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000016008 ortholog_one2one 28 retrogenes
Callithrix jacchus ENSCJAG00000000723 ortholog_one2one 29 retrogenes
Danio rerio ENSDARG00000037350 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000007411 possible_ortholog 18 retrogenes
Equus caballus ENSECAG00000016489 ortholog_one2one 7 retrogenes
Erinaceus europaeus ENSEEUG00000004394 possible_ortholog 39 retrogenes
Felis catus ENSFCAG00000012284 ortholog_one2one 34 retrogenes
Homo sapiens ENSG00000163682 ortholog_one2one 28 retrogenes
Gorilla gorilla ENSGGOG00000022799 ortholog_one2one 26 retrogenes
Gadus morhua ENSGMOG00000001002 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000012021 possible_ortholog 38 retrogenes
Macropus eugenii ENSMEUG00000016722 ortholog_many2many 8 retrogenes
Myotis lucifugus ENSMLUG00000004597 possible_ortholog 34 retrogenes
Macaca mulatta ENSMMUG00000008553 possible_ortholog 22 retrogenes
Monodelphis domestica ENSMODG00000020553 ortholog_one2many 7 retrogenes
Nomascus leucogenys ENSNLEG00000017100 ortholog_one2one 26 retrogenes
Otolemur garnettii ENSOGAG00000004935 possible_ortholog 20 retrogenes
Pongo abelii ENSPPYG00000014675 ortholog_one2one 10 retrogenes
Pteropus vampyrus ENSPVAG00000000919 possible_ortholog 49 retrogenes
Sarcophilus harrisii ENSSHAG00000004918 ortholog_one2many 8 retrogenes
Sus scrofa ENSSSCG00000025192 ortholog_one2one 15 retrogenes
Tupaia belangeri ENSTBEG00000006042 possible_ortholog 18 retrogenes
Vicugna pacos ENSVPAG00000002023 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_16 95.88 50.52
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2. retro_mmur_105 75.72 88.02
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3. retro_mmur_121 94.79 100.00
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4. retro_mmur_277 65.70 89.06
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5. retro_mmur_307 76.44 90.62
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6. retro_mmur_465 90.62 100.00
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7. retro_mmur_531 92.71 100.00
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8. retro_mmur_574 69.23 53.65
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9. retro_mmur_599 73.60 100.00
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10. retro_mmur_668 80.70 59.38
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11. retro_mmur_704 98.96 100.00
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12. retro_mmur_768 91.30 82.81
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13. retro_mmur_1141 69.63 67.71
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14. retro_mmur_1183 97.92 100.00
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15. retro_mmur_1201 71.70 81.25
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16. retro_mmur_1292 62.59 74.48
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17. retro_mmur_1418 97.93 100.00
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18. retro_mmur_1472 89.64 100.00
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Download FASTA sequences of all ENSMICG00000016778 retrocopies