Parental gene:

RPL9, ENSBTAG00000014518

Aliases:None
Description:60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q3SYR7]
Organism:Cow (Bos taurus)
Coordinates:6:60210360..60215120(-)


>ENSBTAG00000014518
ATGAAGACCATTCTCAGCAACCAGACTGTCGACATCCCAGAAAATGTCGACATTAACTTGAAGGGACGGACAGTTATTGT
GAAGGGCCCCAGAGGCACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTTAGTCTCCTTGGGAAGAAAAAGAAGA
GGCTCCGTGTTGACAAATGGTGGGGAAACAGAAAGGAACTGGCCACTGTTCGCACAATCTGTAGTCACGTACAGAACATG
ATCAAGGGTGTTACACTGGGTTTCCGTTACAAGATGAGGTCGGTGTATGCCCACTTCCCCATCAACGTTGTTATTCAGGA
GAATGGTTCTCTTGTGGAAATCCGAAATTTTTTGGGTGAAAAATACATACGCAGGGTTCGAATGAGGCCAGGGGTTGCCT
GTTCAGTATCTCAAGCCCAGAAAGATGAGTTGATTCTTGAAGGAAATGACATTGAACTTGTGTCAAATTCAGCTGCTTTG
ATTCAGCAAGCCACCACAGTTAAAAACAAGGATATCAGAAAATTTTTGGATGGTATCTATGTTTCTGAAAAAGGAACAGT
TCAGCAGGCTGATGAATAA

Library Parental gene expression (RPM)
SRP017611_brain 85 .24 RPM
SRP017611_kidney 201 .23 RPM
SRP017611_liver 124 .59 RPM
ERP005899_muscle 762 .64 RPM
ERP005899_liver 192 .35 RPM
SRP030211_testis 144 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007317 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000003187 ortholog_many2many 31 retrogenes
Canis familiaris ENSCAFG00000016008 possible_ortholog 28 retrogenes
Callithrix jacchus ENSCJAG00000000723 possible_ortholog 29 retrogenes
Danio rerio ENSDARG00000037350 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000007411 possible_ortholog 18 retrogenes
Equus caballus ENSECAG00000016489 possible_ortholog 7 retrogenes
Erinaceus europaeus ENSEEUG00000004394 possible_ortholog 39 retrogenes
Felis catus ENSFCAG00000012284 possible_ortholog 34 retrogenes
Homo sapiens ENSG00000163682 possible_ortholog 28 retrogenes
Gorilla gorilla ENSGGOG00000022799 possible_ortholog 26 retrogenes
Gadus morhua ENSGMOG00000001002 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000012021 possible_ortholog 38 retrogenes
Macropus eugenii ENSMEUG00000016722 ortholog_many2many 8 retrogenes
Microcebus murinus ENSMICG00000016778 possible_ortholog 18 retrogenes
Myotis lucifugus ENSMLUG00000004597 possible_ortholog 34 retrogenes
Macaca mulatta ENSMMUG00000008553 possible_ortholog 22 retrogenes
Monodelphis domestica ENSMODG00000020553 ortholog_one2many 7 retrogenes
Nomascus leucogenys ENSNLEG00000017100 possible_ortholog 26 retrogenes
Otolemur garnettii ENSOGAG00000004935 possible_ortholog 20 retrogenes
Procavia capensis ENSPCAG00000005834 ortholog_one2many 22 retrogenes
Pongo abelii ENSPPYG00000014675 possible_ortholog 10 retrogenes
Pteropus vampyrus ENSPVAG00000000919 possible_ortholog 49 retrogenes
Sarcophilus harrisii ENSSHAG00000004918 ortholog_one2many 8 retrogenes
Sus scrofa ENSSSCG00000025192 possible_ortholog 15 retrogenes
Tupaia belangeri ENSTBEG00000006042 possible_ortholog 18 retrogenes
Tursiops truncatus ENSTTRG00000014289 ortholog_one2many 13 retrogenes
Vicugna pacos ENSVPAG00000002023 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_51 97.40 100.00
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2. retro_btau_200 97.40 100.00
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3. retro_btau_231 98.44 100.00
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Download FASTA sequences of all ENSBTAG00000014518 retrocopies