Parental gene:

PTBP1, ENSMLUG00000003320

Aliases:None
Description:None
Organism:Microbat (Myotis lucifugus)
Coordinates:GL430150:742520..748077(-)


>ENSMLUG00000003320
GGACAGACACAGTGCAGGGCAGTGTCTTCACAGCGGGGATCGGACGAGCTCTTCTCTGCCTGTGTCACTAACGGACCCTT
TATCATGAGCAGCAACTCAGCCTCTGCAGCAAACGGAAATGACAGCAAAAAGTTCAAAGGTGACAACAGAAGTACAGGTG
TGCCCTCCAGAGTGATCCATATCCGGAAGCTTCCCAGTGATGTCACCGAGGGCGAGGTCATTTCCCTGGGACTGCCTTTT
GGGAAGGTCACCAACCTCTTGATGCTGAAAGGGAAAAACCAGGCCTTCATTGAGATGAACACAGAGGAGGCAGCCAACAC
TATGGTGAACTACTACACCTCGGTGACACCTGTGCTTCGTGGCCAGCCCATCTACATCCAGTTCTCCAACCATAAGGAAC
TTAAGACCGACAGCTCACCCAACCAGGCACGGGCCCAGGCGGCCTTGCAGGCAGTGAACTCAGTTCAGTCGGGGAACCTG
TCACTGGCTGCCTCAGCTGCTGCCGTGGATGCCGGGATGGCGATGGCTGGCCAGAGTCCAGTGCTCAGGATCATCGTGGA
AAACCTCTTCTACCCAGTCACCTTGGACGTGCTTCACCAGATCTTCTCCAAGTTTGGCACAGTTCTGAAGATTATCACTT
TCACCAAGAACAACCAGTTCCAGGCACTGCTGCAGTATGCCGAACCCGTGAGCGCCCAGCATGCTAAGCTGTCGCTGGAT
GGGCAGAACATCTACAATGCTTGCTGTACACTCCGCATCGACTTTTCTAAGCTCACCAGCCTCAACGTCAAGTACAACAA
TGACAAGAGCCGAGACTACACCCGTCCTGACCTGCCCTCTGGTGACAGCCAACCCTCACTGGACCAGACCATGGCTGCAG
CCTTTGGCCTCTCTGTTCCCAATGTGCACGGGGCCCTGGCCCCTCTGGCCATCCCATCAGCGGCAGCAGCGGCGGCGGCA
GCTGGCCGGATCGCCATCCCAGGCCTAGGAGGGGCTGGAAATTCTGTTCTGCTGGTCAGCAACCTCAACCCTGAGAGAGT
CACACCCCAAAGCCTCTTTATTCTTTTCGGCGTGTATGGCGATGTGCAGCGGGTGAAGATTTTGTTCAATAAGAAGGAGA
ATGCCTTGGTACAGATGGCAGATGGGAGCCAGGCCCAGCTGGCCATGAGCCACCTTAACGGACATAAGCTGCATGGAAAG
CCTGTGCGCATCACCCTCTCCAAGCACCAAAACGTACAGCTGCCCCGTGAGGGCCAGGAGGACCAGGGCCTCACCAAAGA
CTACGGGAACTCACCCCTGCACCGCTTCAAGAAGCCTGGCTCTAAGAACTTCCAGAACATCTTCCCACCCTCGGCCACCC
TGCACCTTTCCAACATCCCGCCCTCCGTATCTGAGGACGACCTCAAGATACTCTTCTCCAGCAACGGTGGAATTGTCAAA
GGGTTCAAGTTCTTCCAGAAGGATCGCAAGATGGCGCTGATTCAGATGGGTTCAGTGGAGGAGGCCATCCAGGCACTCAT
CGACCTGCACAACCACGACCTGGGAGAGAACCACCACCTGCGGGTGTCCTTCTCCAAGTCCACTATCTAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020162 ortholog_one2one 1 retrogene
retro_cjac_1901,
Ciona savignyi ENSCSAVG00000007421 ortholog_one2many 1 retrogene
retro_csav_17,
Dasypus novemcinctus ENSDNOG00000000882 possible_ortholog 1 retrogene
retro_dnov_982,
Equus caballus ENSECAG00000018845 ortholog_one2one 1 retrogene
retro_ecab_330,
Echinops telfairi ENSETEG00000006890 ortholog_many2many 1 retrogene
retro_etel_1573,
Homo sapiens ENSG00000011304 ortholog_one2one 1 retrogene
retro_hsap_1354,
Gorilla gorilla ENSGGOG00000005090 ortholog_one2one 1 retrogene
retro_ggor_1054,
Macropus eugenii ENSMEUG00000006710 ortholog_one2many 2 retrogenes
retro_meug_1447, retro_meug_67,
Mus musculus ENSMUSG00000006498 ortholog_one2one 1 retrogene
retro_mmus_1072,
Nomascus leucogenys ENSNLEG00000000864 ortholog_one2one 1 retrogene
retro_nleu_1834,
Pongo abelii ENSPPYG00000009289 ortholog_one2one 1 retrogene
retro_pabe_1122,
Pan troglodytes ENSPTRG00000010165 ortholog_one2one 1 retrogene
retro_ptro_928,
Rattus norvegicus ENSRNOG00000010448 ortholog_one2many 2 retrogenes
retro_rnor_1994, retro_rnor_2478,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_755 76.36 51.23
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Download FASTA sequences of all ENSMLUG00000003320 retrocopies