Parental gene:

MMU.1427, ENSMMUG00000006007

Aliases:None
Description:proteasome subunit beta type-5 [Source:RefSeq peptide;Acc:NP_001247774]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:85854955..85864267(-)


>ENSMMUG00000006007
ACACTAGACATGGCGCTTGCCAGCGTGTTGGAGAGACCGCTACCAGTGAACCAGCGCGGGTTTTTCGGACTCGGGGGTCG
TGCAGATCTGCTAGATATAGGTCCAGGGAGTCCCAGTGATGGGCTGAGTCTGGCCGCGCCCGGCTGGGGTGTCCCAGAAG
AGCCAGGGATCGAAATGCTTCATGGAACAACCACCCTGGCCTTCAAGTTCCGCCATGGAGTCATAGTTGCAGCTGACTCC
AGGGCTACAGCGGGTGCTTACATTGCCTCCCAGACGGTGAAGAAGGTGATAGAGATCAACCCATACCTGCTAGGCACCAT
GGCTGGGGGCGCAGCGGATTGCAGCTTCTGGGAACGGCTGTTGGCGCGGCAATGTCGAATCTATGAGCTTCGAAATAAGG
AACGCATCTCTGTAGCAGCTGCCTCCAAACTGCTTGCCAACATGGTGTATCAGTACAAAGGCATGGGGCTGTCCATGGGC
ACCATGATCTGTGGCTGGGATAAGAGAGGCCCTGGCCTCTACTACGTGGACAGTGAAGGGAACCGGATCTCAGGGGCCAC
CTTCTCTGTAGGTTCTGGCTCTGTGTATGCGTATGGGGTCATGGATCGGGGCTATTCCTATGACCTGGAAGTGGAGCAGG
CCTATGATCTGGCCCGTCGAGCCATCTACCAAGCCACCTACCGAGATGCCTACTCAGGAGGTGCAGTCAACCTCTACCAC
GTGCGGGAGGATGGCTGGATCAGAGTCTCCAGTGACAATGTAGCTGATCTACATGAGAAGTACAGTGGCTCTACTCCCTG
A

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 57 .20 RPM
SRP007412_brain 22 .86 RPM
SRP007412_cerebellum 18 .79 RPM
SRP007412_heart 26 .09 RPM
SRP007412_kidney 40 .61 RPM
SRP007412_liver 54 .43 RPM
SRP007412_testis 31 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008299 ortholog_one2one 4 retrogenes
retro_cjac_1983, retro_cjac_35, retro_cjac_3888, retro_cjac_4076,
Homo sapiens ENSG00000100804 ortholog_one2one 2 retrogenes
retro_hsap_1634, retro_hsap_95,
Gorilla gorilla ENSGGOG00000026856 ortholog_one2one 2 retrogenes
retro_ggor_1232, retro_ggor_156,
Latimeria chalumnae ENSLACG00000015194 ortholog_one2many 1 retrogene
retro_lcha_3,
Macropus eugenii ENSMEUG00000003572 ortholog_one2one 1 retrogene
retro_meug_28,
Myotis lucifugus ENSMLUG00000014281 ortholog_one2one 1 retrogene
retro_mluc_1428,
Mus musculus ENSMUSG00000022193 ortholog_one2one 1 retrogene
retro_mmus_2887,
Nomascus leucogenys ENSNLEG00000014891 ortholog_one2one 2 retrogenes
retro_nleu_1063, retro_nleu_2936,
Oryctolagus cuniculus ENSOCUG00000013109 ortholog_one2one 1 retrogene
retro_ocun_176,
Pongo abelii ENSPPYG00000005654 ortholog_one2many 1 retrogene
retro_pabe_171,
Sus scrofa ENSSSCG00000002036 ortholog_one2many 1 retrogene
retro_sscr_616,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1558 71.32 100.00
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Download FASTA sequences of all ENSMMUG00000006007 retrocopies