Parental gene:

UNG, ENSMMUG00000006957

Aliases:None
Description:Uracil-DNA glycosylase [Source:UniProtKB/TrEMBL;Acc:F7DWI5]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:110101477..110124086(+)


>ENSMMUG00000006957
ATGATCGGCCAGAAGACGCTCTACTCCTTCTTCTCCCCTAGCCCCGCCAGGAAGCGACGCGCCCCCAGCCCCGAGCCGGC
CGTCCTGGGGACTGGCGTGGCGGCCGTGCCTGAGGAGAACAGAGATGCGGCGGCCAACCCCCCCAAGAAGGCCCCGGCCG
CGCAGGAGGAGCCCGGGACGCCGCCCTCCTCGCCGCTGAGTGCTGAGCAGTTGGACCGGATCCAGAGGAACAAGGCCGCG
GCCCTGCTCAGACTTGCGGCCCGCAACGTGCCCGTGGGCTTTGGGGAGAGCTGGAAGAAGCACCTCAGCGGGGAGTTCGG
AAAACCGTATTTTATCAAGCTAATGGGATTTGTTGCAGAAGAAAGAAAGCATTACACTGTTTATCCACCCCCACACCAAG
TCTTCACCTGGACCCAGATGTGTGACATAAGAGATGTGAAGGTTGTCATCCTGGGACAGGATCCATATCATGGACCTAAT
CAAGCTCATGGGCTCTGCTTTAGTGTTCAAAGGCCTGTTCCACCTCCGCCCAGTTTGGAGAACATTTATAAAGAGCTGTC
TACAGACGTAGAGGATTTTGTTCATCCTGGCCATGGAGATTTATCTGGATGGGCCAAGCAAGGTGTTCTCCTACTCAACG
CTGTCCTCACGGTTCGGGCCCATCAAGCCAACTCTCATAAGGAGAGAGGCTGGGAGCAATTCACTGATGCAGTTGTATCC
TGGCTAAATCAGAACTCAAATGGCCTTGTTTTCTTGCTCTGGGGCTCTTATGCTCAGAAGAAGGGCAGTGCCATCGATAG
GAAGCGGCACCATGTACTACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGGTTCTTTGGATGTAGACACTTTT
CAAAGACTAATGAGCTGCTGCAGAAGTCTGGCAAGAAGCCCATCGACTGGAAGGAGCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 5 .15 RPM
SRP007412_brain_prefrontal_cortex 9 .28 RPM
SRP007412_cerebellum 5 .30 RPM
SRP007412_heart 10 .36 RPM
SRP007412_kidney 13 .03 RPM
SRP007412_liver 6 .77 RPM
SRP007412_testis 17 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016525 ortholog_one2one 1 retrogene
retro_amel_153,
Canis familiaris ENSCAFG00000011144 ortholog_one2one 1 retrogene
retro_cfam_1567,
Callithrix jacchus ENSCJAG00000010134 ortholog_one2one 2 retrogenes
retro_cjac_1467, retro_cjac_520,
Cavia porcellus ENSCPOG00000004634 ortholog_one2many 3 retrogenes
retro_cpor_1339, retro_cpor_6, retro_cpor_863,
Dasypus novemcinctus ENSDNOG00000005335 ortholog_one2one 2 retrogenes
retro_dnov_1001, retro_dnov_627,
Equus caballus ENSECAG00000008080 ortholog_one2one 1 retrogene
retro_ecab_747,
Felis catus ENSFCAG00000008349 ortholog_one2one 1 retrogene
retro_fcat_445,
Macropus eugenii ENSMEUG00000015792 ortholog_one2one 3 retrogenes
retro_meug_1594, retro_meug_1877, retro_meug_2077,
Myotis lucifugus ENSMLUG00000010755 ortholog_one2one 3 retrogenes
retro_mluc_1305, retro_mluc_2060, retro_mluc_989,
Mustela putorius furo ENSMPUG00000003463 ortholog_one2one 1 retrogene
retro_mputfur_1592,
Nomascus leucogenys ENSNLEG00000001442 ortholog_one2one 3 retrogenes
retro_nleu_1325, retro_nleu_1950, retro_nleu_2802,
Oryctolagus cuniculus ENSOCUG00000003145 ortholog_one2one 1 retrogene
retro_ocun_1767,
Otolemur garnettii ENSOGAG00000007441 ortholog_one2one 2 retrogenes
retro_ogar_1593, retro_ogar_2716,
Pongo abelii ENSPPYG00000004929 ortholog_one2one 3 retrogenes
retro_pabe_1354, retro_pabe_1355, retro_pabe_2792,
Pan troglodytes ENSPTRG00000005419 ortholog_one2one 1 retrogene
retro_ptro_1108,
Sus scrofa ENSSSCG00000009938 ortholog_one2one 1 retrogene
retro_sscr_1202,
Ictidomys tridecemlineatus ENSSTOG00000006894 ortholog_one2one 1 retrogene
retro_itri_661,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1564 70.24 66.45
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2. retro_mmul_2115 72.11 78.59
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Download FASTA sequences of all ENSMMUG00000006957 retrocopies