Parental gene:

MMU.148, ENSMMUG00000019906

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:20:54739735..54758882(-)


>ENSMMUG00000019906
TACCCTCTTACCAATTATACTTTTGGTACAAAAGAGCCCCTCTATGAGAAGGACAGCTCTGTGGCAGCCAGATTTCAGCG
CATGAGGGAAGAATTTGATAAAATTGGAATGAGGAGGACTGTAGAAGGGGTTCTGATTGTACATGAGCACCGGCTACCCC
ATGTGTTACTGCTACAGCTGGGAACAACTTTCTTCAAACTACCTGGTGGTGAACTTAACCCAGGAGAAGATGAAGTTGAA
GGACTAAAACGCTTAATGACAGAGATACTGGGTCGTCAGGATGGAGTTTTGCAAGACTGGGTCATTGACGACTGCATTGG
TAACTGGTGGAGACCAAATTTTGAACCTCCTCAGTATCCATATATTCCTGCACATATTACAAAGCCTAAGGAACATAAGA
AGTTGTTTCTGGTTCAGCTTCAAGAAAAAGCCTTGTTTGCAGTCCCTAAAAATTACAAGCTGGTAGCTGCACCATTGTTT
GAATTGTATGACAATGCACCAGGATATGGACCCATCATTTCTAGTCTCCCTCAGCTGTTGAGCAGGTTCAATTTTATATA
CAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 86 .87 RPM
SRP007412_brain 136 .14 RPM
SRP007412_cerebellum 109 .32 RPM
SRP007412_heart 24 .79 RPM
SRP007412_kidney 46 .60 RPM
SRP007412_liver 11 .28 RPM
SRP007412_testis 43 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012724 possible_ortholog 3 retrogenes
retro_cjac_1121, retro_cjac_2211, retro_cjac_4100,
Echinops telfairi ENSETEG00000013634 ortholog_one2one 1 retrogene
retro_etel_622,
Loxodonta africana ENSLAFG00000028465 possible_ortholog 1 retrogene
retro_lafr_610,
Mustela putorius furo ENSMPUG00000003451 possible_ortholog 1 retrogene
retro_mputfur_158,
Oryctolagus cuniculus ENSOCUG00000017224 possible_ortholog 2 retrogenes
retro_ocun_154, retro_ocun_87,
Pteropus vampyrus ENSPVAG00000014583 ortholog_one2one 2 retrogenes
retro_pvam_533, retro_pvam_711,
Sarcophilus harrisii ENSSHAG00000009651 ortholog_one2one 1 retrogene
retro_shar_469,
Sus scrofa ENSSSCG00000029848 possible_ortholog 2 retrogenes
retro_sscr_117, retro_sscr_185,
Tarsius syrichta ENSTSYG00000014602 ortholog_one2one 4 retrogenes
retro_tsyr_1685, retro_tsyr_1888, retro_tsyr_790, retro_tsyr_988,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1360 68.51 95.74
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Download FASTA sequences of all ENSMMUG00000019906 retrocopies