Parental gene: | U2AF1, ENSMMUG00000022769 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 3:3570401..3584990(+) |
>ENSMMUG00000022769
ATGGCGGAGTATCTGGCCTCCATCTTCGGCACCGAGAAAGACAAAGTCAACTGTTCATTTTATTTCAAAATTGGAGCATG
TCGTCATGGAGACAGGTGCTCTCGGTTGCACAATAAACCGACGTTTAGCCAGACCATTGCCCTCTTGAACATTTACCGTA
ACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGCTGTGCCGTGAGCGATGTTGAGATGCAGGAACACTATGATGAA
TTTTTTGAGGAGGTTTTTACAGAAATGGAGGAGAAGTATGGGGAAGTTGAGGAGATGAACGTCTGTGACAACCTGGGAGA
CCACCTGGTGGGGAACGTGTACGTCAAGTTTCGCCGTGAGGAAGATGCGGAAAAGGCTGTGATTGACTTGAATAACCGTT
GGTTTAATGGACAGCCGATCCATGCCGAGCTGTCACCCGTGACGGACTTCAGAGAAGCCTGCTGCCGTCAGTATGAGATG
GGAGAATGCACACGAGGCGGCTTCTGCAACTTCATGCATTTGAAGCCCATTTCCAGAGAGCTGCGGCGGGAGCTGTATGG
GCGCCGTCGCAAGAAGCATAGATCAAGATCCCGATCCCGGGAGCGTCGTTCTCGGTCTAGAGACCGTGGTCGTGGCGGTG
GCGGTGGCGGTGGTGGAGGCGGCGGCGGACGGGAGCGTGACAGGAGGCGGTCGAGAGATCGCGAAAGATCTGGGCGATTC
TGA
ATGGCGGAGTATCTGGCCTCCATCTTCGGCACCGAGAAAGACAAAGTCAACTGTTCATTTTATTTCAAAATTGGAGCATG
TCGTCATGGAGACAGGTGCTCTCGGTTGCACAATAAACCGACGTTTAGCCAGACCATTGCCCTCTTGAACATTTACCGTA
ACCCTCAAAACTCTTCCCAGTCTGCTGACGGTTTGCGCTGTGCCGTGAGCGATGTTGAGATGCAGGAACACTATGATGAA
TTTTTTGAGGAGGTTTTTACAGAAATGGAGGAGAAGTATGGGGAAGTTGAGGAGATGAACGTCTGTGACAACCTGGGAGA
CCACCTGGTGGGGAACGTGTACGTCAAGTTTCGCCGTGAGGAAGATGCGGAAAAGGCTGTGATTGACTTGAATAACCGTT
GGTTTAATGGACAGCCGATCCATGCCGAGCTGTCACCCGTGACGGACTTCAGAGAAGCCTGCTGCCGTCAGTATGAGATG
GGAGAATGCACACGAGGCGGCTTCTGCAACTTCATGCATTTGAAGCCCATTTCCAGAGAGCTGCGGCGGGAGCTGTATGG
GCGCCGTCGCAAGAAGCATAGATCAAGATCCCGATCCCGGGAGCGTCGTTCTCGGTCTAGAGACCGTGGTCGTGGCGGTG
GCGGTGGCGGTGGTGGAGGCGGCGGCGGACGGGAGCGTGACAGGAGGCGGTCGAGAGATCGCGAAAGATCTGGGCGATTC
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 25 .07 RPM |
| SRP007412_brain | 19 .61 RPM |
| SRP007412_cerebellum | 31 .51 RPM |
| SRP007412_heart | 25 .03 RPM |
| SRP007412_kidney | 27 .23 RPM |
| SRP007412_liver | 21 .53 RPM |
| SRP007412_testis | 110 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000015558 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000160201 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000011460 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014054 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000061613 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000014737 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016504 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011463 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1071 | 78.23 | 51.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2126 | 74.26 | 80.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000022769 retrocopies