Parental gene: | Snrnp27, ENSMUSG00000001158 |
| Aliases: | Snrnp27, 2610209M04Rik, AI449063, AU022368, Ry1 |
| Description: | small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:MGI Symbol;Acc:MGI:1913868] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 6:86675220..86684522(-) |
>ENSMUSG00000001158
ATGGGTCGAAGTCGTAGCCGCTCCCCGCGTAGGGAACGTAGGCGGTCCCGGTCCACATCTCGGGATCGAGAAAGAAGACG
CCGAGAAAGGTCCAGGTCCAGGGAGAGAGATCGCAGAAGGAGCCGCTCAAGATCTCCACACCGAAGACGCTCCAGGTCTC
CAAGACGACATAGATCCACATCTCCCTCCCCTTCTCGACTGAAAGAAAGAAGAGATGAGGAAAAGAAAGAAACTAAAGAA
ATAAAGAACAAAGAACGGCAGATCACTGAGGAAGACCTGGAGGGTAAAACAGAGGAAGAAATAGAAATGATGAAATTAAT
GGGATTTGCCTCTTTTGACTCCACAAAAGGGAAGAAGGTAGACGGCTCTGTAAATGCCTATGCCATCAACGTGTCTCAAA
AGAGGAAGTACAGGCAGTACATGAATCGAAAAGGCGGATTCAACAGACCTCTGGATTTTATTGCATGA
ATGGGTCGAAGTCGTAGCCGCTCCCCGCGTAGGGAACGTAGGCGGTCCCGGTCCACATCTCGGGATCGAGAAAGAAGACG
CCGAGAAAGGTCCAGGTCCAGGGAGAGAGATCGCAGAAGGAGCCGCTCAAGATCTCCACACCGAAGACGCTCCAGGTCTC
CAAGACGACATAGATCCACATCTCCCTCCCCTTCTCGACTGAAAGAAAGAAGAGATGAGGAAAAGAAAGAAACTAAAGAA
ATAAAGAACAAAGAACGGCAGATCACTGAGGAAGACCTGGAGGGTAAAACAGAGGAAGAAATAGAAATGATGAAATTAAT
GGGATTTGCCTCTTTTGACTCCACAAAAGGGAAGAAGGTAGACGGCTCTGTAAATGCCTATGCCATCAACGTGTCTCAAA
AGAGGAAGTACAGGCAGTACATGAATCGAAAAGGCGGATTCAACAGACCTCTGGATTTTATTGCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 16 .21 RPM |
| SRP007412_cerebellum | 20 .93 RPM |
| SRP007412_heart | 15 .44 RPM |
| SRP007412_kidney | 18 .88 RPM |
| SRP007412_liver | 7 .59 RPM |
| SRP007412_testis | 21 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000037746 | ortholog_one2one | 4 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000003042 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000017344 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000124380 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000022967 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012332 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012022 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025674 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1977 | 54.88 | 50.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2105 | 66.91 | 87.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000001158 retrocopies