Parental gene:

SNRNP27, ENSSSCG00000025674

Aliases:None
Description:small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Source:HGNC Symbol;Acc:30240]
Organism:Pig (Sus scrofa)
Coordinates:3:75950674..75960507(-)


>ENSSSCG00000025674
ATGGGTCGCAGCCGCAGCCGCTCTCCGCGGAGGGAGCGTAGGAGATCCCGGTCCACATCCCGGGAGAGAGAACGCAGGCG
CCGAGAAAGGTCCCGGTCCCGCGAGCGAGATCGTAGAAGGAGCCGCTCTCGTTCCCCCCACAGAAGACGTTCCAGGTCTC
CAAGGCGACATAGATCCACATCTCCCTCCCCTTCTCGACTGAAAGAAAGAAGAGACGAAGAAAAGAAAGAAACAAAAGAA
ATAAAGAGCAAAGAACGTCAGATTACTGTAGAGGAAGACTTAGAGGGCAAAACAGAGGAAGAAATAGAAATGATGAAGTT
AATGGGATTTGCCTCCTTTGACTCTACAAAAGGAAAAAAGGTGGATGGCTCTGTAAATGCCTATGCCATAAATGTGTCTC
AGAAGAGGAAGTATAGGCAGTACATGAATCGAAAAGGTGGATTTAACAGACCTTTGGATTTCATTGCATGA

Library Parental gene expression (RPM)
SRP014902_placenta 3 .45 RPM
SRP014902_testis 9 .76 RPM
SRP018856_adipose 8 .30 RPM
SRP018288_kidney 18 .22 RPM
SRP018288_lung 9 .98 RPM
SRP018288_liver 11 .35 RPM
SRP018288_heart 26 .95 RPM
SRP035408_liver 27 .74 RPM
SRP035408_brain 62 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000037746 ortholog_one2one 4 retrogenes
retro_btau_1352, retro_btau_375, retro_btau_514, retro_btau_515,
Choloepus hoffmanni ENSCHOG00000003042 ortholog_one2one 1 retrogene
retro_chof_2589,
Echinops telfairi ENSETEG00000017344 ortholog_one2one 1 retrogene
retro_etel_655,
Homo sapiens ENSG00000124380 ortholog_one2one 1 retrogene
retro_hsap_3387,
Mus musculus ENSMUSG00000001158 ortholog_one2one 2 retrogenes
retro_mmus_1977, retro_mmus_2105,
Oryctolagus cuniculus ENSOCUG00000022967 ortholog_one2one 1 retrogene
retro_ocun_1281,
Pongo abelii ENSPPYG00000012332 ortholog_one2one 2 retrogenes
retro_pabe_1990, retro_pabe_2782,
Pan troglodytes ENSPTRG00000012022 ortholog_one2one 1 retrogene
retro_ptro_2300,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_285 76.92 91.67
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Download FASTA sequences of all ENSSSCG00000025674 retrocopies