Parental gene:

Hdgf, ENSMUSG00000004897

Aliases:Hdgf, AI118077, D3Ertd299e
Description:hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
Organism:Mouse (Mus musculus)
Coordinates:3:87906320..87916132(+)


>ENSMUSG00000004897
ATGTCGCGATCCAACCGGCAGAAAGAGTACAAGTGCGGAGACCTGGTGTTTGCGAAGATGAAAGGATACCCACACTGGCC
GGCCCGGATTGATGAGATGCCTGAGGCTGCAGTGAAGTCAACAGCCAACAAATACCAAGTCTTTTTTTTTGGGACCCATG
AGACGGCATTCCTGGGCCCCAAAGACCTCTTCCCTTATGAGGAATCCAAGGAGAAGTTTGGCAAGCCCAACAAGAGGAAA
GGGTTCAGCGAGGGGCTGTGGGAGATCGAGAACAACCCTACAGTCAAGGCCTCTGGCTACCAGTCCTCCCAGAAAAAGAG
TTGTGCGGCAGAGCCCGAGGTGGAGCCCGAAGCCCATGAGGGTGACGGTGATAAGAAGGGCAGTGCAGAGGGCAGCAGCG
ACGAAGAAGGGAAACTGGTGATCGATGAACCAGCCAAGGAGAAGAACGAAAAGGGCACGCTGAAGAGGAGAGCAGGGGAT
GTGTTGGAGGACTCCCCTAAACGTCCCAAGGAGTCAGGAGACCATGAGGAGGAGGACAAGGAGATAGCTGCCTTGGAGGG
TGAGAGGCCCCTGCCTGTAGAGGTGGAGAAGAACAGCACCCCCTCTGAGCCAGACTCTGGCCAGGGACCTCCTGCAGAGG
AAGAAGAGGGAGAGGAAGAGGCTGCCAAGGAAGAGGCTGAAGCCCAGGGCGTCAGAGATCATGAGAGCCTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 104 .11 RPM
SRP007412_cerebellum 140 .60 RPM
SRP007412_heart 122 .59 RPM
SRP007412_kidney 182 .58 RPM
SRP007412_liver 180 .62 RPM
SRP007412_testis 293 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000039793 ortholog_one2one 1 retrogene
retro_btau_216,
Callithrix jacchus ENSCJAG00000006157 ortholog_one2one 2 retrogenes
retro_cjac_338, retro_cjac_4022,
Dasypus novemcinctus ENSDNOG00000010231 ortholog_one2many 1 retrogene
retro_dnov_4,
Equus caballus ENSECAG00000011178 ortholog_one2one 1 retrogene
retro_ecab_5,
Echinops telfairi ENSETEG00000005243 ortholog_one2one 1 retrogene
retro_etel_1899,
Homo sapiens ENSG00000143321 ortholog_one2one 1 retrogene
retro_hsap_33,
Myotis lucifugus ENSMLUG00000010413 ortholog_one2one 1 retrogene
retro_mluc_257,
Mus musculus ENSMUSG00000028484 within_species_paralog 1 retrogene
retro_mmus_2896,
Pongo abelii ENSPPYG00000000703 ortholog_one2one 1 retrogene
retro_pabe_6,
Pan troglodytes ENSPTRG00000001474 ortholog_one2one 1 retrogene
retro_ptro_1,
Sus scrofa ENSSSCG00000006468 ortholog_one2one 1 retrogene
retro_sscr_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3647 83.13 100.00
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Download FASTA sequences of all ENSMUSG00000004897 retrocopies