Parental gene:

Lsm2, ENSMUSG00000007050

Aliases:Lsm2, D17H6S56E-2, D17H6S56E2, Dmapl, Dmpkap, G7b, Sm-X5, SmX5, snRNP
Description:LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:90676]
Organism:Mouse (Mus musculus)
Coordinates:17:34981861..34985891(+)


>ENSMUSG00000007050
ATGGTGTTTTGGGGGAAACCTTTAGCAAGTCCAAGAGAAAGCCCACGGGCGCCGGGGGAGAACGGGAAGCGAGCCTTGCA
CTTCTGTGCTGTTGACGAGGACTTTGTGAGGCTCTTCTACTCCTTTTTCAAGTCTCTTGTGGGCAAGGATGTAGTCGTGG
AACTCAAGAATGACCTGAGCATCTGTGGAACCCTCCACTCTGTGGACCAGTACCTCAATATCAAACTAACCGACATCAGT
GTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTCAAGAACTGCTTCATCAGGGGCTCAGTCGTCCGCTATGTGCA
GCTGCCAGCAGATGAGGTGGACACACAACTGCTACAGGATGCAGCAAGGAAGGAAGCCCTTCAGCAGAAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 6 .59 RPM
SRP007412_cerebellum 9 .12 RPM
SRP007412_heart 6 .79 RPM
SRP007412_kidney 7 .08 RPM
SRP007412_liver 9 .48 RPM
SRP007412_testis 99 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002601 ortholog_one2one 2 retrogenes
retro_cjac_1828, retro_cjac_2088,
Felis catus ENSFCAG00000004511 ortholog_one2one 1 retrogene
retro_fcat_309,
Macaca mulatta ENSMMUG00000006832 ortholog_one2one 3 retrogenes
retro_mmul_1389, retro_mmul_1875, retro_mmul_2099,
Nomascus leucogenys ENSNLEG00000006371 ortholog_one2one 1 retrogene
retro_nleu_960,
Ochotona princeps ENSOPRG00000003668 ortholog_one2one 2 retrogenes
retro_opri_250, retro_opri_917,
Pongo abelii ENSPPYG00000016461 ortholog_one2one 1 retrogene
retro_pabe_2765,
Pan troglodytes ENSPTRG00000017986 ortholog_one2one 3 retrogenes
retro_ptro_1349, retro_ptro_2063, retro_ptro_2284,
Rattus norvegicus ENSRNOG00000048725 ortholog_one2one 1 retrogene
retro_rnor_1463,
Ictidomys tridecemlineatus ENSSTOG00000013144 ortholog_one2one 1 retrogene
retro_itri_189,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_931 77.42 65.26
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000007050 retrocopies