Parental gene: | Mfap1a, ENSMUSG00000068479 |
| Aliases: | Mfap1a, 4432409M24Rik, Mfap1 |
| Description: | microfibrillar-associated protein 1A [Source:MGI Symbol;Acc:MGI:1914782] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:121491910..121506665(-) |
>ENSMUSG00000068479
ATGTCGGTCCCAAGCGCACTCATGAAGCAGCCGCCCATCCAGTCTACGGCTGGGGCCGTCCCAGTTCGAAACGAGAAAGG
TGAGATCTCAATGGAAAAGGTGAAGGTGAAACGATATGTGTCCGGAAAGAGACCAGATTATGCCCCTATGGAGTCCTCAG
ATGAAGAGGATGAAGAATTTCAGTTCATTAAGAAAGCTAAGGAACAAGAAGCAGAGCCTGAGGAACAGGAGGAGGACTCA
TCCAGTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGCGATTGGCTCGACACAGAAAGAT
CGTGGAACCTGAAGTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGATGCTTGGCGCCTGGAACGAGAAGACAGCAGTG
AGGAAGAGGAGGAAGAGATTGACGATGAAGAAATTGAGCGGCGCCGTGGCATGATGCGTCAGCGAGCACAGGAGAGGAAA
AATGAAGAGATGGAAGTCATGGAGGTGGAAGATGAAGGGCGCTCTGGGGAGGAGTCTGAGTCAGAGTCTGAGTATGAGGA
GTACACAGACAGTGAGGATGAAATGGAGCCTCGACTTAAGCCTGTCTTCATTCGAAAGAAGGATCGGGTGACAGTTCAAG
AACGAGAAGCTGAAGCATTGAAACAGAAGGAACTGGAACAAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACC
CTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATAC
TGATGATGAAAATGACGAGGAAGAATACGAGGCATGGAAAGTCCGCGAGCTCAAAAGAATCAAGAGGGAGAGAGAAGACC
GAGAAGCGCTTGAAAAGGAGAAAGCAGAAATTGAACGCATGAGAAACCTGACTGAGGAAGAAAGGCGGGCAGAACTTCGG
GCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAAGTTTCTACAGAAGTATTATCACCGAGGTGCCTT
CTTCATGGATGAGGATGAAGAAGTCTACAAGAGAGACTTTAGTGCACCTACTCTTGAGGACCATTTCAACAAAACCATTC
TTCCTAAAGTCATGCAGGTCAAGAATTTTGGACGGTCTGGTCGCACCAAGTACACCCACCTTGTGGATCAAGATACCACT
TCCTTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAACACAAAATTCTTTAAACAAAAGGCAGCAGGGGTACGAGATGT
ATTTGAGCGACCATCTGCCAAGAAGAGGAAAACCACCTAG
ATGTCGGTCCCAAGCGCACTCATGAAGCAGCCGCCCATCCAGTCTACGGCTGGGGCCGTCCCAGTTCGAAACGAGAAAGG
TGAGATCTCAATGGAAAAGGTGAAGGTGAAACGATATGTGTCCGGAAAGAGACCAGATTATGCCCCTATGGAGTCCTCAG
ATGAAGAGGATGAAGAATTTCAGTTCATTAAGAAAGCTAAGGAACAAGAAGCAGAGCCTGAGGAACAGGAGGAGGACTCA
TCCAGTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGCGATTGGCTCGACACAGAAAGAT
CGTGGAACCTGAAGTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGATGCTTGGCGCCTGGAACGAGAAGACAGCAGTG
AGGAAGAGGAGGAAGAGATTGACGATGAAGAAATTGAGCGGCGCCGTGGCATGATGCGTCAGCGAGCACAGGAGAGGAAA
AATGAAGAGATGGAAGTCATGGAGGTGGAAGATGAAGGGCGCTCTGGGGAGGAGTCTGAGTCAGAGTCTGAGTATGAGGA
GTACACAGACAGTGAGGATGAAATGGAGCCTCGACTTAAGCCTGTCTTCATTCGAAAGAAGGATCGGGTGACAGTTCAAG
AACGAGAAGCTGAAGCATTGAAACAGAAGGAACTGGAACAAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACC
CTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATAC
TGATGATGAAAATGACGAGGAAGAATACGAGGCATGGAAAGTCCGCGAGCTCAAAAGAATCAAGAGGGAGAGAGAAGACC
GAGAAGCGCTTGAAAAGGAGAAAGCAGAAATTGAACGCATGAGAAACCTGACTGAGGAAGAAAGGCGGGCAGAACTTCGG
GCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAAGTTTCTACAGAAGTATTATCACCGAGGTGCCTT
CTTCATGGATGAGGATGAAGAAGTCTACAAGAGAGACTTTAGTGCACCTACTCTTGAGGACCATTTCAACAAAACCATTC
TTCCTAAAGTCATGCAGGTCAAGAATTTTGGACGGTCTGGTCGCACCAAGTACACCCACCTTGTGGATCAAGATACCACT
TCCTTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAACACAAAATTCTTTAAACAAAAGGCAGCAGGGGTACGAGATGT
ATTTGAGCGACCATCTGCCAAGAAGAGGAAAACCACCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 14 .27 RPM |
| SRP007412_cerebellum | 17 .80 RPM |
| SRP007412_heart | 15 .10 RPM |
| SRP007412_kidney | 14 .90 RPM |
| SRP007412_liver | 6 .23 RPM |
| SRP007412_testis | 8 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000013870 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013000 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000048222 | within_species_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010206 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015984 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014628 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006967 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000005050 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2386 | 74.76 | 69.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2638 | 82.80 | 56.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000068479 retrocopies