Parental gene: | DNAJC15, ENSOCUG00000001696 |
| Aliases: | None |
| Description: | DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:HGNC Symbol;Acc:20325] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 8:51967134..52039685(-) |
>ENSOCUG00000001696
ATGGCTGCTCGGGCTGGCGTCGCCCCCGCCGGCGAGGGGCTGCGCTATGCCGAATACGTGCCGCCCTCTGCCAAACGGCC
CGACGCCGAGATCGACCACGGTCTGGCAAGAAGTTTGATAGCTGTAGGATTGGGTGTTGCAGCTCTTGCATTTGCAGGTC
GCTATGCATTTCAGATCTGGAAACCTTTAGAACAAGTAATCACAGAAGCAACAAGAAAGATTTCAACTCCTAGTTTTTCA
TCCTACTATAAAGGAGGATTTGAACAGAAAATGAGTAGGCGAGAAGCTAGTCTTATTTTAGGTGTAAGCCCATCTGCTGG
TAAGGCCAAGATTAGAACAGCTCACAGGAGAATCATGATTTTGAATCACCCAGATAAAGGAGGATCGCCTTATCTAGCTA
CTAAAATAAACGAAGCAAAAGATTTGTTAGAAGCAACCACCAAGCAT
ATGGCTGCTCGGGCTGGCGTCGCCCCCGCCGGCGAGGGGCTGCGCTATGCCGAATACGTGCCGCCCTCTGCCAAACGGCC
CGACGCCGAGATCGACCACGGTCTGGCAAGAAGTTTGATAGCTGTAGGATTGGGTGTTGCAGCTCTTGCATTTGCAGGTC
GCTATGCATTTCAGATCTGGAAACCTTTAGAACAAGTAATCACAGAAGCAACAAGAAAGATTTCAACTCCTAGTTTTTCA
TCCTACTATAAAGGAGGATTTGAACAGAAAATGAGTAGGCGAGAAGCTAGTCTTATTTTAGGTGTAAGCCCATCTGCTGG
TAAGGCCAAGATTAGAACAGCTCACAGGAGAATCATGATTTTGAATCACCCAGATAAAGGAGGATCGCCTTATCTAGCTA
CTAAAATAAACGAAGCAAAAGATTTGTTAGAAGCAACCACCAAGCAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .00 RPM |
| SRP017611_kidney | 17 .94 RPM |
| SRP017611_brain | 11 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000034785 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004664 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017589 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000003485 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000007757 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000008785 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000022632 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000120675 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016338 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000004343 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000008684 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000013689 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001704 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001759 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014043 | within_species_paralog | 5 retrogenes | |
| Ochotona princeps | ENSOPRG00000016191 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000005323 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005831 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000011281 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007683 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012805 | ortholog_one2one | 1 retrogene | |
| Taeniopygia guttata | ENSTGUG00000012364 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015580 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000001445 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_487 | 56.82 | 58.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_882 | 56.79 | 53.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_936 | 57.81 | 84.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1101 | 100.00 | 51.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000001696 retrocopies