Parental gene: | DNAJC15, ENSEEUG00000008785 |
| Aliases: | None |
| Description: | DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:HGNC Symbol;Acc:20325] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_2919:1319..38501(+) |
>ENSEEUG00000008785
ATGGCCGCCCACTCGGGAGAGGGACTTCGCTACGCGGAGTACTCGCCGCCCGCGAATAGATTGGCTGACGCGGACATTGA
CCGGCGCCTGGCACGAAGTCTGATAGCTGTTGGACTGGGTGTTGCAACACTTGCATTTGCAGGTCGCTATGCATTTCAGA
TTTGGAAACCTCTAGAACAAGTAATCACAGAAACTGCAAAGAAGATTTCAACTCCTAGCCTTTTGTCATACTACAAAGGA
GGATTTGAACAGAAAATGAGTAGACGAGAAGCTAGTCTTATTTTGGGTGTAAGCCCATCTGCTGGTAAAGCCAAGATTAG
AACAGCTCACAGGAGAATCATGATTTTGAACCACCCAGATAAAGGTGGATCTCCTTACTTAGCAACCAAAATAAATGAAG
CAAAAGACTTGCTCGAAGCAACCACTAAGCATTGA
ATGGCCGCCCACTCGGGAGAGGGACTTCGCTACGCGGAGTACTCGCCGCCCGCGAATAGATTGGCTGACGCGGACATTGA
CCGGCGCCTGGCACGAAGTCTGATAGCTGTTGGACTGGGTGTTGCAACACTTGCATTTGCAGGTCGCTATGCATTTCAGA
TTTGGAAACCTCTAGAACAAGTAATCACAGAAACTGCAAAGAAGATTTCAACTCCTAGCCTTTTGTCATACTACAAAGGA
GGATTTGAACAGAAAATGAGTAGACGAGAAGCTAGTCTTATTTTGGGTGTAAGCCCATCTGCTGGTAAAGCCAAGATTAG
AACAGCTCACAGGAGAATCATGATTTTGAACCACCCAGATAAAGGTGGATCTCCTTACTTAGCAACCAAAATAAATGAAG
CAAAAGACTTGCTCGAAGCAACCACTAAGCATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 26 .53 RPM |
| SRP017611_kidney | 39 .95 RPM |
| SRP017611_brain | 16 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000034785 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004664 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017589 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000003485 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000007757 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000006955 | within_species_paralog | 9 retrogenes | |
| Felis catus | ENSFCAG00000022632 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000120675 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016338 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000004343 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000008684 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000013689 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001704 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001759 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000001696 | ortholog_one2one | 4 retrogenes | |
| Ochotona princeps | ENSOPRG00000016191 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000005323 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005831 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000011281 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007683 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012805 | ortholog_one2one | 1 retrogene | |
| Taeniopygia guttata | ENSTGUG00000012364 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015580 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000001445 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_64 | 82.84 | 93.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_93 | 59.21 | 50.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_95 | 85.14 | 50.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_360 | 90.10 | 70.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_eeur_608 | 88.00 | 51.39 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000008785 retrocopies