Parental gene:

PCBP3, ENSOCUG00000002696

Aliases:None
Description:poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:8651]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018946:74543..147972(-)


>ENSOCUG00000002696
ATGGGGGAAGGTGACGCCATCTGGGCCCCATCCATCCTTGCTCACAGCACCCTCGGCACCGTAAGTCACCACCCCCAGCT
GCACCTTGGGAGAAAGATGGAGTCCAAGGTCTCGGAAGGTGGCCTGAACGTGACCCTGACAATCCGCCTGCTGATGCACG
GGAAGGAAGTTGGAAGCATCATTGGCAAGAAAGGAGAGACTGTGAAGAAGATGCGTGAAGAGAGTGGTGCAAGGATCAAC
ATTTCAGAAGGAAACTGCCCAGAGAGAATCGTGACCATCACAGGCCCAACAGACGCCATCTTCAAGGCCTTTGCAATGAT
TGCATACAAGTTTGAGGAGGACATCATTAGCTCCATGAGCAACAGCCCTGCCACCAGCAAGCCACCGGTGACGCTGAGGC
TGGTGGTCCCGGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGCGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGT
GCCCAAGTCCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGGGCAGTGACCATCTCGGGGACGCCAGATGCCAT
CATCCAGTGTGTCAAGCAGATCTGTGTGGTCATGCTGGAGTCCCCACCGAAAGGTGCCACCATCCCCTACCGCCCAAAGC
CCGCCTCCACCCCTGTCATTTTTGCAGGTGGTCAGGCCTACACAATCCAGGGACAGTACGCCATCCCCCATCCGGATTTG
ACCAAGCTCCACCAGCTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGTCTGGA
TGCCAGCCCCCCGGCCAGCACTCACGAGCTCACCATTCCCAATGATCTAATAGGCTGTATAATTGGACGCCAAGGGACAA
AAATCAATGAAATTCGCCAGATGTCTGGAGCTCAGATCAAAATTGCCAACGCCACTGAAGGGTCATCAGAGCGTCAGATC
ACCATCACGGGGACCCCAGCCAACATCAGCCTTGCCCAATATCTCATCAACGCCAGGCTGACGTCTGAGGTCACCGGGAT
GGGCGCGCTCTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 0 .10 RPM
SRP017611_brain 20 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000003648 ortholog_one2one 1 retrogene
retro_cpor_257,
Dipodomys ordii ENSDORG00000003640 ortholog_one2one 2 retrogenes
retro_dord_742, retro_dord_748,
Myotis lucifugus ENSMLUG00000003074 ortholog_one2one 1 retrogene
retro_mluc_574,
Nomascus leucogenys ENSNLEG00000002639 ortholog_one2one 1 retrogene
retro_nleu_2044,
Oryctolagus cuniculus ENSOCUG00000022490 within_species_paralog 3 retrogenes
retro_ocun_10, retro_ocun_1622, retro_ocun_898,
Rattus norvegicus ENSRNOG00000001245 ortholog_one2one 1 retrogene
retro_rnor_2656,
Sorex araneus ENSSARG00000007629 ortholog_one2one 1 retrogene
retro_sara_414,
Tursiops truncatus ENSTTRG00000015075 ortholog_one2one 1 retrogene
retro_ttru_1095,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1257 82.08 68.57
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Download FASTA sequences of all ENSOCUG00000002696 retrocopies