Parental gene: | HINT1, ENSOCUG00000006607 |
| Aliases: | HINT1, HINT |
| Description: | histidine triad nucleotide binding protein 1 (HINT1), mRNA [Source:RefSeq mRNA;Acc:NM_001082623] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:14380901..14393488(-) |
>ENSOCUG00000006607
ATGGCAGATGAGATCGCCAAGGCTCAGGTCGCCCGACCTGGTGGCGACACGATCTTCGGGAAGATCATCCGCAAGGAAAT
CCCAGCCAAAATCATTTTCGAGGATGACCAGTGTCTTGCTTTCCATGACATTTCCCCTCAAGCACCAACACATTTTCTGG
TGATACCTAAGAAACATATATCCCAGATTTCTGCAGCAGAGGATGCTGATGAAAGTCTTCTTGGACATTTAATGATTGTT
GGCAAGAAATGTGCTGCTGACCTGGGCCTAAAGAAGGGTTACCGAATGGTGGTGAACGAGGGCTCCGATGGCGGACAGTC
CGTCTATCACGTTCATCTCCACGTTCTTGGGGGTCGGCAGATGAACTGGCCCCCTGGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 91 .89 RPM |
| SRP017611_kidney | 155 .38 RPM |
| SRP017611_liver | 38 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017774 | possible_ortholog | 4 retrogenes | |
| Bos taurus | ENSBTAG00000010959 | possible_ortholog | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000032152 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014398 | ortholog_many2many | 3 retrogenes | |
| Equus caballus | ENSECAG00000023180 | ortholog_one2many | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008175 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010127 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000169567 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011967 | ortholog_many2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005368 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001091 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000009985 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000028727 | ortholog_many2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011639 | possible_ortholog | 4 retrogenes | |
| Mus musculus | ENSMUSG00000020267 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012431 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000027206 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008850 | ortholog_one2many | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000004737 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015747 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017206 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000622 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005834 | ortholog_many2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000014264 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027920 | ortholog_many2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008653 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_214 | 97.62 | 100.00 | Please wait, loading  |
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| 2. | retro_ocun_643 | 96.06 | 100.00 | Please wait, loading |
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| 3. | retro_ocun_821 | 84.92 | 100.00 | Please wait, loading |
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| 4. | retro_ocun_968 | 84.92 | 99.21 | Please wait, loading |
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| 5. | retro_ocun_1374 | 54.37 | 78.57 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000006607 retrocopies