Parental gene: | ATP5J, ENSOCUG00000006681 |
| Aliases: | None |
| Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 [Source:HGNC Symbol;Acc:847] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 14:154862455..154873959(-) |
>ENSOCUG00000006681
ATGATCCTGCAGAAGCTCTTCAGGTTCTCCTCTGTCGTCCGCTCAGCAGTTGCAGTCCATCTGCGGAGGAACATTGGTGT
AACAGCAGTGGCATTTAATAAGGAGCTTGATCCTGTACAGAAACTCTTCGTGGACAAGATTAGAGAATACAAATCTAAGC
GACAGGCATCAGGAGGACCTGTTGATGCAGGCCCATCATACCAGCAAGATCTGGAGAAAGAGCTTTTTAAGCTGAAGCAA
ATGTTTGGTAAAGCAGATATGAATACGTTCCCTACCTTCAAATTCGAAGATCCCAAATTTGAAACCATTGAAAAACCCCA
GTCCTGA
ATGATCCTGCAGAAGCTCTTCAGGTTCTCCTCTGTCGTCCGCTCAGCAGTTGCAGTCCATCTGCGGAGGAACATTGGTGT
AACAGCAGTGGCATTTAATAAGGAGCTTGATCCTGTACAGAAACTCTTCGTGGACAAGATTAGAGAATACAAATCTAAGC
GACAGGCATCAGGAGGACCTGTTGATGCAGGCCCATCATACCAGCAAGATCTGGAGAAAGAGCTTTTTAAGCTGAAGCAA
ATGTTTGGTAAAGCAGATATGAATACGTTCCCTACCTTCAAATTCGAAGATCCCAAATTTGAAACCATTGAAAAACCCCA
GTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .17 RPM |
| SRP017611_kidney | 54 .94 RPM |
| SRP017611_brain | 19 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017167 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000000605 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000024922 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013803 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000017858 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000011228 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000006438 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000029970 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000154723 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008265 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000015988 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008725 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021011 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001001 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002412 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011305 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000013809 | ortholog_one2one | 3 retrogenes | |
| Sorex araneus | ENSSARG00000000742 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000022586 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_326 | 100.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_419 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_789 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1517 | 76.25 | 73.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ocun_1888 | 96.26 | 99.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000006681 retrocopies