Parental gene: | ENSOCUG00000009154 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 11:57343490..57377029(+) |
>ENSOCUG00000009154
ATGCACAGGAAACACCTCCAGGAGATTCCAGACCAGAGTGGCAACGTCACCACTAGTTTCACGTGGGGATGGGATTCCAG
CAAGACTTCTGAACTGCTGTCAGGCATGGGGGTCTCCGCCCTGGAGAAGGAGGAAGTGGACAGTGAAAACATCCCCCAGG
AACTGCTCTCCAATGTGGGCCACCCACAGAGCCCCCCGCGGAAACGCCTGAAGAGCAAAGGCAATGAGAAAGACTTCGTG
ATCATCCGCAGACCGAAGATCAATAGAGAAAATGTCCCAGGTGTTTCGTGGGATTCCCTTCCCGATGAGCTGCTCCTGGG
AATCTTTTCCTGTCTCTGCCTCCCCGAGCTACTGAAAGTCTCCGGGGTTTGTAAGAGATGGTACTGCCTAGCGTTTGATG
AGTCTCTGTGGCAGACATTAGACCTCACAGGTAAAAATCTGCACCCTGATGTGATTGGCCGCTTGTTGTCTCGAGGGGTG
GTTGCCTTCCGCTGCCCGCGATCATTTATGGACCGACCATTGGTTGAACATTTCAGCTCTTTCCGTGTGCAGCACATGGA
CCTGTCGAACTCAGTAATAAACGTGTCTACCCTTCACGGCATTCTGTCTCAGTGCTCCAAGTTGCAAAACCTAAGCCTGG
AAGGCCTACAGCTTTCGGATCTCATCGTCAATAATCTTGCACAGAACTCAAATTTAATGCGACTAAACCTTTGTGGGTGT
TCTGGATTCTCTGAATCTGCCCTGAAGACTTTGCTAAGCGGCTGCTCCAGACTGGATGAGCTGAACCTCTCCTGGTGCTA
TGACTTCACTGAGAAGCACGTGCAGGTGGCTGTGGCGCATGTCTCAGAGACCATCACCCAGCTGAATCTTAGTGGCTACC
GAAAGAATCTCCAAAAGTCAGATGTCTCTACCCTAGTTAGAAGATGCCCCAATCTTGTCCACCTAGACTTAAGTGACAGC
ATCATGCTAAAGAATGACTGCTTTCCGGAATTTCACCAGCTCAACTACCTCCAACACCTCTCACTCAGTCGATGCTATGA
TATAATACCTGAAACTTTACTTGAACTTGGAGAAATTCCCACGCTAAAAACACTACAAGTTTTCGGAATCGTGCCAGACG
GAACCCTCCAACTGCTAAGGGAAGCCCTTCCTCATCTACAGATTAATTGCTCCCATTTTACCACCATTGCCAGGCCAACT
ATTGGCAACAAAAAGAACCAGGAGATATGGGGCATCAAATGCCGACTGACACTGCAGAAACCCAGTTGTCTATGA
ATGCACAGGAAACACCTCCAGGAGATTCCAGACCAGAGTGGCAACGTCACCACTAGTTTCACGTGGGGATGGGATTCCAG
CAAGACTTCTGAACTGCTGTCAGGCATGGGGGTCTCCGCCCTGGAGAAGGAGGAAGTGGACAGTGAAAACATCCCCCAGG
AACTGCTCTCCAATGTGGGCCACCCACAGAGCCCCCCGCGGAAACGCCTGAAGAGCAAAGGCAATGAGAAAGACTTCGTG
ATCATCCGCAGACCGAAGATCAATAGAGAAAATGTCCCAGGTGTTTCGTGGGATTCCCTTCCCGATGAGCTGCTCCTGGG
AATCTTTTCCTGTCTCTGCCTCCCCGAGCTACTGAAAGTCTCCGGGGTTTGTAAGAGATGGTACTGCCTAGCGTTTGATG
AGTCTCTGTGGCAGACATTAGACCTCACAGGTAAAAATCTGCACCCTGATGTGATTGGCCGCTTGTTGTCTCGAGGGGTG
GTTGCCTTCCGCTGCCCGCGATCATTTATGGACCGACCATTGGTTGAACATTTCAGCTCTTTCCGTGTGCAGCACATGGA
CCTGTCGAACTCAGTAATAAACGTGTCTACCCTTCACGGCATTCTGTCTCAGTGCTCCAAGTTGCAAAACCTAAGCCTGG
AAGGCCTACAGCTTTCGGATCTCATCGTCAATAATCTTGCACAGAACTCAAATTTAATGCGACTAAACCTTTGTGGGTGT
TCTGGATTCTCTGAATCTGCCCTGAAGACTTTGCTAAGCGGCTGCTCCAGACTGGATGAGCTGAACCTCTCCTGGTGCTA
TGACTTCACTGAGAAGCACGTGCAGGTGGCTGTGGCGCATGTCTCAGAGACCATCACCCAGCTGAATCTTAGTGGCTACC
GAAAGAATCTCCAAAAGTCAGATGTCTCTACCCTAGTTAGAAGATGCCCCAATCTTGTCCACCTAGACTTAAGTGACAGC
ATCATGCTAAAGAATGACTGCTTTCCGGAATTTCACCAGCTCAACTACCTCCAACACCTCTCACTCAGTCGATGCTATGA
TATAATACCTGAAACTTTACTTGAACTTGGAGAAATTCCCACGCTAAAAACACTACAAGTTTTCGGAATCGTGCCAGACG
GAACCCTCCAACTGCTAAGGGAAGCCCTTCCTCATCTACAGATTAATTGCTCCCATTTTACCACCATTGCCAGGCCAACT
ATTGGCAACAAAAAGAACCAGGAGATATGGGGCATCAAATGCCGACTGACACTGCAGAAACCCAGTTGTCTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .16 RPM |
| SRP017611_kidney | 1 .62 RPM |
| SRP017611_brain | 2 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013562 | ortholog_many2many | 4 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000006980 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018275 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000013303 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016025 | ortholog_one2many | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000008375 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016823 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016814 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_158 | 100.00 | 99.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000009154 retrocopies