Parental gene: | Skp2, ENSRNOG00000016823 |
| Aliases: | Skp2, RGD1562456 |
| Description: | S-phase kinase-associated protein 2 [Source:RefSeq peptide;Acc:NP_001099886] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:77593580..77621639(-) |
>ENSRNOG00000016823
ATGCATAGGAAGCACCTTCAGGAGATTCCGGACCAGAGTAGCAACGTCACCACCAGCTTCACGTGGGGATGGGATTCCAG
CAAGACTTCTGAACTGCTGTCAGGCATGGGTGTCTCTGCCTTGGAGAAGGAGGAGGTGGACAGTGAGAACATCCCACATG
GACTGCTCTCAAACCTCGGCCACCCCCAGAGCCCTCCAAGGAAAAGGCTAAAGAGCAAAGGGAGTGACAAAGACTTTGTG
ATCATTCGTCGGCCTAAGCTCAATCGAGAGAACTTTCCAGGTGTTTCCTGGGACTCCCTTCCAGATGAGCTGCTCCTGGG
AATCTTTTCCTGTCTGTGCCTCCCTGAGCTTTTGAGAGTCTCTGGAGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATG
AGTCTCTCTGGCAGTCCCTAGACCTCGCAGGCAAAAATCTGCACCCAGACGTGACAGTGCGCCTGCTCTCTCGAGGAGTC
GTGGCCTTCCGCTGCCCACGGTCGTTTATGGAGCAGCCACTGGGCGAAAGCTTCAGCTCTTTCCGTGTACAGCACATGGA
CCTGTCGAACTCAGTTATAAATGTGTCAAACCTCCACGGGATTCTGTCCGAGTGCTCCAAGCTGCAGAATCTGAGTCTGG
AAGGCCTGCAGCTTTCAGATCCCATTGTCACTACTCTTGCGCAGAATGAAAACTTGGTGCGACTGAACCTTTGTGGGTGC
TCTGGATTTTCTGAGTCTGCCGTGGCCACCCTGCTGAGCAGCTGCTCCAGACTGGATGAACTGAACCTCTCCTGGTGCTT
TGACTTCACTGAGAAGCATGTGCAAGCGGCCGTGGCACATTTACCAGATACGCTCACCCAGCTGAACCTCAGCGGCTACC
GAAAGAACCTCCAGAAAACAGATCTTTGTACCCTAATTAAACGATGCCCCAACCTCGTCCGCCTCGACTTAAGTGACAGT
ATCATGCTGAAGAATGACTGCTTTCCAGAATTTTTTCAACTCAACTACCTCCAACACCTCTCGCTCAGCCGGTGCTACGA
TATAATACCTGAGACGCTACTTGAACTCGGAGAAATCCCCACACTAAAAACACTACAAGTTTTTGGGATCGTGCCAGACG
GGACCCTTCAGCTACTGAGAGAAGCTCTTCCTCGCCTGCAGATTAATTGTGCCTATTTCACCTCCATTGCAAGGCCAACT
ATGGACAACAAGAAGAACCCGGAGATTTGGGGTATCAAATGCCGACTGACCCTGCAAAAGCCCAGTTTATGA
ATGCATAGGAAGCACCTTCAGGAGATTCCGGACCAGAGTAGCAACGTCACCACCAGCTTCACGTGGGGATGGGATTCCAG
CAAGACTTCTGAACTGCTGTCAGGCATGGGTGTCTCTGCCTTGGAGAAGGAGGAGGTGGACAGTGAGAACATCCCACATG
GACTGCTCTCAAACCTCGGCCACCCCCAGAGCCCTCCAAGGAAAAGGCTAAAGAGCAAAGGGAGTGACAAAGACTTTGTG
ATCATTCGTCGGCCTAAGCTCAATCGAGAGAACTTTCCAGGTGTTTCCTGGGACTCCCTTCCAGATGAGCTGCTCCTGGG
AATCTTTTCCTGTCTGTGCCTCCCTGAGCTTTTGAGAGTCTCTGGAGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATG
AGTCTCTCTGGCAGTCCCTAGACCTCGCAGGCAAAAATCTGCACCCAGACGTGACAGTGCGCCTGCTCTCTCGAGGAGTC
GTGGCCTTCCGCTGCCCACGGTCGTTTATGGAGCAGCCACTGGGCGAAAGCTTCAGCTCTTTCCGTGTACAGCACATGGA
CCTGTCGAACTCAGTTATAAATGTGTCAAACCTCCACGGGATTCTGTCCGAGTGCTCCAAGCTGCAGAATCTGAGTCTGG
AAGGCCTGCAGCTTTCAGATCCCATTGTCACTACTCTTGCGCAGAATGAAAACTTGGTGCGACTGAACCTTTGTGGGTGC
TCTGGATTTTCTGAGTCTGCCGTGGCCACCCTGCTGAGCAGCTGCTCCAGACTGGATGAACTGAACCTCTCCTGGTGCTT
TGACTTCACTGAGAAGCATGTGCAAGCGGCCGTGGCACATTTACCAGATACGCTCACCCAGCTGAACCTCAGCGGCTACC
GAAAGAACCTCCAGAAAACAGATCTTTGTACCCTAATTAAACGATGCCCCAACCTCGTCCGCCTCGACTTAAGTGACAGT
ATCATGCTGAAGAATGACTGCTTTCCAGAATTTTTTCAACTCAACTACCTCCAACACCTCTCGCTCAGCCGGTGCTACGA
TATAATACCTGAGACGCTACTTGAACTCGGAGAAATCCCCACACTAAAAACACTACAAGTTTTTGGGATCGTGCCAGACG
GGACCCTTCAGCTACTGAGAGAAGCTCTTCCTCGCCTGCAGATTAATTGTGCCTATTTCACCTCCATTGCAAGGCCAACT
ATGGACAACAAGAAGAACCCGGAGATTTGGGGTATCAAATGCCGACTGACCCTGCAAAAGCCCAGTTTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .88 RPM |
| SRP017611_kidney | 3 .21 RPM |
| SRP017611_brain | 5 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013562 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018275 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000013303 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016025 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009154 | ortholog_one2many | 1 retrogene | |
| Pelodiscus sinensis | ENSPSIG00000008375 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_621 | 93.21 | 90.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000016823 retrocopies