Parental gene: | HSD17B12, ENSOCUG00000016351 |
| Aliases: | None |
| Description: | hydroxysteroid (17-beta) dehydrogenase 12 [Source:HGNC Symbol;Acc:18646] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:183332715..183528107(+) |
>ENSOCUG00000016351
ATGGAGACCGCTCTCCCTGCCGCCGGCTTCCTGTATTGGGTGGGCGCCGGCACGGTGGCCTACCTGGCCCTGCGCATCTC
GTACTCGCTCTTCTGGGCCCTTCGGGTCTGGGGTGTGGGCAACGAGGCGTGGGTCGGGCCGGGGCTCGGTGAATGGGCAG
TTGTGACAGGCAGCACTGATGGAATTGGAAAATCATATGCAGAACAGTTAGCAAAGCGTGGAATGAACGTTGTTCTCATC
AGCAGATCTCAGGATAAGCTAAACCAAGTTTCCAATGAAATAAAAGAAAAATTCAAAGTGGAGACACGAACTATTGCTGT
TGACTTTGCATCAGAAGATATTTATAACAAAATTGAAACAGGCTTGGCAGGTCTTGAAATTGGCGTTTTAGTGAACAACG
TGGGAATGTCATATGAGTATCCTGAATACTTTTTGGACATCCCTGACTTGGACAATACCATCAAGAAACTGATAAATATT
AATGTTCTTTCTGTTTGTAAGATGACACGATTGGTGCTGCCTCGCATGGTAGAAAGATCTAAAGGTGCAATTCTGAACAT
CTCCTCTGCCAGTGGCACGTTCCCAGTTCCACTGCTGACCATCTACTCTGCAACCAAGGCTTTTGTAGATTTCTTCTCTC
AGTGCCTCCATGAGGAATACAGGAGCAAGGGCATCTTTGTGCAGAGCGTGCTGCCATACTACGTTGCTACAAAACTGGCT
AAAATCCGGAAGCCTACTTTTGATAAGCCCTCGTCTGAGACGTTTGTGAAGTCTGCAATTAAGACAGTTGGCTTGCAGTC
TCGCACTAATGGATACCTGGTCCATTCTCTGATGGTAAGTCAATCTTCA
ATGGAGACCGCTCTCCCTGCCGCCGGCTTCCTGTATTGGGTGGGCGCCGGCACGGTGGCCTACCTGGCCCTGCGCATCTC
GTACTCGCTCTTCTGGGCCCTTCGGGTCTGGGGTGTGGGCAACGAGGCGTGGGTCGGGCCGGGGCTCGGTGAATGGGCAG
TTGTGACAGGCAGCACTGATGGAATTGGAAAATCATATGCAGAACAGTTAGCAAAGCGTGGAATGAACGTTGTTCTCATC
AGCAGATCTCAGGATAAGCTAAACCAAGTTTCCAATGAAATAAAAGAAAAATTCAAAGTGGAGACACGAACTATTGCTGT
TGACTTTGCATCAGAAGATATTTATAACAAAATTGAAACAGGCTTGGCAGGTCTTGAAATTGGCGTTTTAGTGAACAACG
TGGGAATGTCATATGAGTATCCTGAATACTTTTTGGACATCCCTGACTTGGACAATACCATCAAGAAACTGATAAATATT
AATGTTCTTTCTGTTTGTAAGATGACACGATTGGTGCTGCCTCGCATGGTAGAAAGATCTAAAGGTGCAATTCTGAACAT
CTCCTCTGCCAGTGGCACGTTCCCAGTTCCACTGCTGACCATCTACTCTGCAACCAAGGCTTTTGTAGATTTCTTCTCTC
AGTGCCTCCATGAGGAATACAGGAGCAAGGGCATCTTTGTGCAGAGCGTGCTGCCATACTACGTTGCTACAAAACTGGCT
AAAATCCGGAAGCCTACTTTTGATAAGCCCTCGTCTGAGACGTTTGTGAAGTCTGCAATTAAGACAGTTGGCTTGCAGTC
TCGCACTAATGGATACCTGGTCCATTCTCTGATGGTAAGTCAATCTTCA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .88 RPM |
| SRP017611_kidney | 32 .33 RPM |
| SRP017611_brain | 29 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011325 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000004834 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000149084 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002003 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017959 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009102 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003343 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003522 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005473 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005103 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1335 | 58.67 | 52.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000016351 retrocopies