Parental gene:

HSD17B12, ENSPTRG00000003522

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:43776738..43952440(+)


>ENSPTRG00000003522
ATGGAGAGCGCTCTCCCCGCCGCCGGCTTCCTGTACTGGGTCGGCGCGGGCACCGTGGCCTACCTAGCCCTGCGTATTTC
GTACTCGCTCTTCACGGCCCTCCGGGTCTGGGGAGTGGGGAATGAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAG
TTGTCACAGGTAGTACTGATGGAATTGGAAAATCATATGCAGAAGAGTTAGCAAAGCATGGAATGAAGGTTGTCCTTATC
AGCAGATCAAAGGATAAACTTGACCAGGTTTCCAGTGAAATAAAAGAAAAATTCAAAGTGGAGACAAGAACCATTGCTGT
TGACTTTGCATCAGAAGATATTTATGATAAAATTAAAACAGCCTTGGCTGGTCTTGAAATCGGCATCTTAGTGAACAACG
TGGGAATGTCGTATGAGTATCCTGAATACTTTTTGGATGTTCCTGACTTGGACAATGTGATCAAGAAAATGATAAATATT
AATATTCTTTCTGTTTGTAAGATGACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAACAT
TTCATCTGGCAGTGGCATGCTCCCTGTCCCACTCTTGACCATCTATTCTGCAACCAAGACTTTTGTAGATTTTTTCTCTC
AGTGCCTCCATGAGGAGTATAGGAGCAAGGGCGTCTTTGTGCAGAGTGTTCTGCCATACTTCGTAGCTACAAAACTGGCT
AAAATCCGGAAGCCAACTTTGGATAAGCCCTCTCCGGAGACGTTTGTGAAGTCTGCAATTAAAACAGTCGGCCTGCAATC
CCGAACCAATGGATACCTGATCCATGCTCTTATGGGCTCGATAATCTCAAACCTGCCTTCTTGGATTTATTTGAAAATAG
TCATGAATATGAACAAGTCTACACGGGCTCACTATCTGAAGAAAACCAAGAAGAACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .41 RPM
SRP007412_cerebellum 25 .70 RPM
SRP007412_heart 25 .62 RPM
SRP007412_kidney 60 .80 RPM
SRP007412_liver 40 .00 RPM
SRP007412_testis 22 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011325 ortholog_one2many 1 retrogene
retro_cjac_2489,
Dipodomys ordii ENSDORG00000004834 ortholog_one2one 1 retrogene
retro_dord_561,
Homo sapiens ENSG00000149084 ortholog_one2one 1 retrogene
retro_hsap_3684,
Gorilla gorilla ENSGGOG00000002003 ortholog_one2one 1 retrogene
retro_ggor_2491,
Nomascus leucogenys ENSNLEG00000017959 ortholog_one2one 1 retrogene
retro_nleu_2273,
Oryctolagus cuniculus ENSOCUG00000016351 ortholog_one2one 1 retrogene
retro_ocun_1335,
Otolemur garnettii ENSOGAG00000009102 ortholog_one2one 1 retrogene
retro_ogar_3391,
Pongo abelii ENSPPYG00000003343 ortholog_one2one 1 retrogene
retro_pabe_3021,
Ictidomys tridecemlineatus ENSSTOG00000005473 ortholog_one2one 1 retrogene
retro_itri_1099,
Tursiops truncatus ENSTTRG00000005103 ortholog_one2one 1 retrogene
retro_ttru_772,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2499 82.52 65.06
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Download FASTA sequences of all ENSPTRG00000003522 retrocopies