Parental gene: | HSD17B12, ENSPPYG00000003343 |
| Aliases: | None |
| Description: | hydroxysteroid (17-beta) dehydrogenase 12 [Source:HGNC Symbol;Acc:18646] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:24898379..25070277(-) |
>ENSPPYG00000003343
ATGGAGAGCGCTCTCCCCGCCGCCGGCTTCCTGTACTGGGTCGGCGCGGGCACCGTGGCCTACCTAGCCCTGCGTATTTC
GTACTCGCTCTTCACGGCCCTCCGGGTCTGGGGAATGGGGAATGAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAG
TTGTGACAGGTAGTACTGATGGAATTGGAAAATCATACGCAGAAGAGTTAGCAAAGCATGGAATGAAGGTTGTCCTTATC
AGCAGATCACAGGATAAACTTGACCAGGTTTCCAGTGAAATAAAAGAAAAATTCAAAGTGGAGACAAGAACCATTGCTGT
TGACTTTGCATCAGAAGATATTTATGATAAAATTAAAATGGGCTTGTCTGGTCTTGAAATCGGCATCTTAGTGAATAACG
TGGGAATGTCGTATGAGTATCCTGAATACTTTTTGGATGTTCCTGACTTGGACAATGTGATCAAGAAAAATGATAATATT
AATATTCTTTCTGTTTGTAAGATGACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAACAT
TTCGTCTGGCAGTGGCATGCTCCCTGTCCCACTGTTGACCATCTATTCTGCAACCAAGACTTTTGTAGATTTCTTCTCTC
GGTGCCTCCATGAGGAGTATAGGAGCAAGGGCGTCTTTGTGCAGAGTGTCCTGCCATACTTTGTAGCTACAAAACTGGCT
AAAATCCGGAAGCCAACTTTGGATAAGCCCTCTCCGGAGACGTTTGTGAAGTCTGCAATTAAAACAGTCGGCCTGCAATC
CCGAACCAATGGATACCTGATCCATGCTCTTATGGGCTCAATAATCTCAAACCTGCCTTCTTGGATTTATTTCAAAATAG
TCATGAATATGAACAAGTCTACACGGGCTCACCATCTGAAGAAAACCAAGAAGAAC
ATGGAGAGCGCTCTCCCCGCCGCCGGCTTCCTGTACTGGGTCGGCGCGGGCACCGTGGCCTACCTAGCCCTGCGTATTTC
GTACTCGCTCTTCACGGCCCTCCGGGTCTGGGGAATGGGGAATGAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAG
TTGTGACAGGTAGTACTGATGGAATTGGAAAATCATACGCAGAAGAGTTAGCAAAGCATGGAATGAAGGTTGTCCTTATC
AGCAGATCACAGGATAAACTTGACCAGGTTTCCAGTGAAATAAAAGAAAAATTCAAAGTGGAGACAAGAACCATTGCTGT
TGACTTTGCATCAGAAGATATTTATGATAAAATTAAAATGGGCTTGTCTGGTCTTGAAATCGGCATCTTAGTGAATAACG
TGGGAATGTCGTATGAGTATCCTGAATACTTTTTGGATGTTCCTGACTTGGACAATGTGATCAAGAAAAATGATAATATT
AATATTCTTTCTGTTTGTAAGATGACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAACAT
TTCGTCTGGCAGTGGCATGCTCCCTGTCCCACTGTTGACCATCTATTCTGCAACCAAGACTTTTGTAGATTTCTTCTCTC
GGTGCCTCCATGAGGAGTATAGGAGCAAGGGCGTCTTTGTGCAGAGTGTCCTGCCATACTTTGTAGCTACAAAACTGGCT
AAAATCCGGAAGCCAACTTTGGATAAGCCCTCTCCGGAGACGTTTGTGAAGTCTGCAATTAAAACAGTCGGCCTGCAATC
CCGAACCAATGGATACCTGATCCATGCTCTTATGGGCTCAATAATCTCAAACCTGCCTTCTTGGATTTATTTCAAAATAG
TCATGAATATGAACAAGTCTACACGGGCTCACCATCTGAAGAAAACCAAGAAGAAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .61 RPM |
| SRP007412_cerebellum | 8 .88 RPM |
| SRP007412_heart | 9 .00 RPM |
| SRP007412_kidney | 14 .25 RPM |
| SRP007412_liver | 17 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011325 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000004834 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000149084 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002003 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017959 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016351 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009102 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003522 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005473 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005103 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3021 | 78.80 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000003343 retrocopies