Parental gene: | BLOC1S5, ENSOCUG00000025755 |
| Aliases: | None |
| Description: | biogenesis of lysosomal organelles complex-1, subunit 5, muted [Source:HGNC Symbol;Acc:18561] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 12:1786114..1837467(-) |
>ENSOCUG00000025755
ATGAGTGGCGGAGGGGAAGAGACCCCTGTGGGTTGTGAGGTCCCCACGGGCGGCGGCGGCAAGAAGCGGGACTCGCTGGG
GACCGCGGGCTCAGCGCATCTCATTATCAAGGATCTCGGAGAAATTCATTCGAGACTTTTGGATCACAGACCGGTTATTC
AAGGAGAAACTCGTTATTTTGTAAAAGAATTTGAAGAAAAACGCGGTCTTCGAGAAATGCGAGTTCTTGAAAATCTGAAG
AATATGATCCACGAAACAAATGAACACACTCTCCCCAAATGTAGAGAAACTATGCAGGACAACTTACAGCAAGTCCTCCA
GAGATTGCAAGCGGCTAATGACTCAGTCTGTAGACTCCAACAGAGAGAACAGGAACGAAAAAAGATGTATAATGACCGCT
TGGTGGCTAACGAGAAGCGGCGCAGCCTCCAGTGGGAAGAGTTTATGAAGGAACAGCCCCAGAAGCGGGCAGCAGTGGAC
GAAGAGCACAGGAAGGCGGTGGCCAGGCTGCGGGAGCAGTATGCCGAGATGCAGAAGGACCTCGCCAAGTTTGCAACCTT
CTAA
ATGAGTGGCGGAGGGGAAGAGACCCCTGTGGGTTGTGAGGTCCCCACGGGCGGCGGCGGCAAGAAGCGGGACTCGCTGGG
GACCGCGGGCTCAGCGCATCTCATTATCAAGGATCTCGGAGAAATTCATTCGAGACTTTTGGATCACAGACCGGTTATTC
AAGGAGAAACTCGTTATTTTGTAAAAGAATTTGAAGAAAAACGCGGTCTTCGAGAAATGCGAGTTCTTGAAAATCTGAAG
AATATGATCCACGAAACAAATGAACACACTCTCCCCAAATGTAGAGAAACTATGCAGGACAACTTACAGCAAGTCCTCCA
GAGATTGCAAGCGGCTAATGACTCAGTCTGTAGACTCCAACAGAGAGAACAGGAACGAAAAAAGATGTATAATGACCGCT
TGGTGGCTAACGAGAAGCGGCGCAGCCTCCAGTGGGAAGAGTTTATGAAGGAACAGCCCCAGAAGCGGGCAGCAGTGGAC
GAAGAGCACAGGAAGGCGGTGGCCAGGCTGCGGGAGCAGTATGCCGAGATGCAGAAGGACCTCGCCAAGTTTGCAACCTT
CTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .08 RPM |
| SRP017611_kidney | 10 .85 RPM |
| SRP017611_brain | 3 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017324 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000039732 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000010026 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000030827 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027342 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_269 | 79.63 | 86.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1051 | 96.77 | 99.47 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000025755 retrocopies