Parental gene: | CCT4, ENSOGAG00000003974 |
| Aliases: | None |
| Description: | chaperonin containing TCP1, subunit 4 (delta) [Source:HGNC Symbol;Acc:1617] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873543.1:18983618..18998621(-) |
>ENSOGAG00000003974
ATGCCTGAGAACGTGGCACCCCGGAGCGGAGCGCCCGCCGGTGCTCCCGGTGGCCGCGGAAAGGGCGCTTATCAGGACCG
CGACAAGCCAGCCCAAATCCGCTTCAGCAACATTTCTGCAGCCAAAGCTGTTGCTGATGCTATTAGAACGAGCCTTGGAC
CAAAAGGAATGGATAAAATGATTCAAGATGGGAAAGGTGATGTGACTATCACAAACGATGGGGCCACCATTTTGAAACAA
ATGCAGGTATTGCATCCAGCAGCCAGAATGCTGGTGGAGCTGTCCAAGGCTCAAGATATAGAAGCAGGAGATGGCACTAC
ATCAGTAGTCATCATTGCTGGCTCGCTCTTAGATTCTTGTACCAAGCTTCTTCAGAAAGGGATTCATCCTACCATCATTT
CCGAGTCATTCCAGAAGGCTTTGGAAAAGGTTGAAATCTTGAATGACATGTCTCGACCTGTGGAACTAAGTGACAGAGAA
ACTTTGTTAAATAGTGCAACCACTTCATTGAACTCCAAGGTTGTCTCTCAGTATTCAAGTCTACTTTCTCCAATGAGTGT
AAATGCAGTGATGAAAGTGATTGACCCAGCCACAGCTACTAGTGTAGATCTTAGAGATATTAAAATAGTTAAGAAGCTTG
GTGGAACAATTGATGACTGTGAATTGGTGGAAGGACTGGTTCTCGTCCAAAAGGTGGCAAATTCTGGCATAACCAGAGTT
GAAAAGGCTAAGNTAACCTACCTTCCTTCTCTCCTACAAAAAAAGAAAAAAGATATCATGGATAATCAAATAGTGGTTTC
TGACTATGCCCAGATGGACCGAGTGCTGAGAGAAGAGAGAGCCTATATCTTAAACTTAGTGAAGCAAATTAAAAAAACAG
GATGTAATGTCCTTCTCATACAGAAGTCTATTCTAAGAGATGCTCTTAGTGATCTTGCATTACATTTTTTGAACAAAATG
AAGATTATGGTGATTAAGGATATTGAAAGAGAAGACATTGAATTCATTTGTAAGACAATTGGAACCAAACCAGTTGCTCA
TATTGACCAGTTCACTCCTGACATGTTGGGCTCTGCTGAGTTAGCTGAGGAAGTCAATTTAAATGGTTCTGGCAAACTGC
TCAAGATTACAGGCTGTGCCAGTCCTGGGAAAACAGTTACAATCGTCGTTCGTGGCTCTAACAAACTGGTGATTGAAGAG
GCTGAGCGCTCCATTCATGATGCCCTATGTGTTATTCGCTGTTTAGTGAAGAAAAGAGCCCTTATTGCAGGAGGTGGTGC
TCCAGAAATAGAGTTGGCCCTCCGATTAACTGAATATTCACGAACATTGAGTGGTATGGAATCCTATTGCGTCCGTGCTT
TTGCAGATGCTATGGAGGTCATTCCATCTACACTAGCTGAAAATGCTGGTCTGAATCCCATTTCTACAGTAACAGAACTA
AGAAACCGGCATGCCCAAGGAGAAAAAACTACAGGCATTAATGTCCGAAAGGGTGGCATTTCCAACATTTTGGAGGAGCT
AGTTGTCCAGCCTCTGTTGGTTTCAGTCAGCGCTTTGACCCTAGCAACTGAAACTGTTCGGAGCATTCTGAAAATTGATG
ATGTGGTAAACACACGATAA
ATGCCTGAGAACGTGGCACCCCGGAGCGGAGCGCCCGCCGGTGCTCCCGGTGGCCGCGGAAAGGGCGCTTATCAGGACCG
CGACAAGCCAGCCCAAATCCGCTTCAGCAACATTTCTGCAGCCAAAGCTGTTGCTGATGCTATTAGAACGAGCCTTGGAC
CAAAAGGAATGGATAAAATGATTCAAGATGGGAAAGGTGATGTGACTATCACAAACGATGGGGCCACCATTTTGAAACAA
ATGCAGGTATTGCATCCAGCAGCCAGAATGCTGGTGGAGCTGTCCAAGGCTCAAGATATAGAAGCAGGAGATGGCACTAC
ATCAGTAGTCATCATTGCTGGCTCGCTCTTAGATTCTTGTACCAAGCTTCTTCAGAAAGGGATTCATCCTACCATCATTT
CCGAGTCATTCCAGAAGGCTTTGGAAAAGGTTGAAATCTTGAATGACATGTCTCGACCTGTGGAACTAAGTGACAGAGAA
ACTTTGTTAAATAGTGCAACCACTTCATTGAACTCCAAGGTTGTCTCTCAGTATTCAAGTCTACTTTCTCCAATGAGTGT
AAATGCAGTGATGAAAGTGATTGACCCAGCCACAGCTACTAGTGTAGATCTTAGAGATATTAAAATAGTTAAGAAGCTTG
GTGGAACAATTGATGACTGTGAATTGGTGGAAGGACTGGTTCTCGTCCAAAAGGTGGCAAATTCTGGCATAACCAGAGTT
GAAAAGGCTAAGNTAACCTACCTTCCTTCTCTCCTACAAAAAAAGAAAAAAGATATCATGGATAATCAAATAGTGGTTTC
TGACTATGCCCAGATGGACCGAGTGCTGAGAGAAGAGAGAGCCTATATCTTAAACTTAGTGAAGCAAATTAAAAAAACAG
GATGTAATGTCCTTCTCATACAGAAGTCTATTCTAAGAGATGCTCTTAGTGATCTTGCATTACATTTTTTGAACAAAATG
AAGATTATGGTGATTAAGGATATTGAAAGAGAAGACATTGAATTCATTTGTAAGACAATTGGAACCAAACCAGTTGCTCA
TATTGACCAGTTCACTCCTGACATGTTGGGCTCTGCTGAGTTAGCTGAGGAAGTCAATTTAAATGGTTCTGGCAAACTGC
TCAAGATTACAGGCTGTGCCAGTCCTGGGAAAACAGTTACAATCGTCGTTCGTGGCTCTAACAAACTGGTGATTGAAGAG
GCTGAGCGCTCCATTCATGATGCCCTATGTGTTATTCGCTGTTTAGTGAAGAAAAGAGCCCTTATTGCAGGAGGTGGTGC
TCCAGAAATAGAGTTGGCCCTCCGATTAACTGAATATTCACGAACATTGAGTGGTATGGAATCCTATTGCGTCCGTGCTT
TTGCAGATGCTATGGAGGTCATTCCATCTACACTAGCTGAAAATGCTGGTCTGAATCCCATTTCTACAGTAACAGAACTA
AGAAACCGGCATGCCCAAGGAGAAAAAACTACAGGCATTAATGTCCGAAAGGGTGGCATTTCCAACATTTTGGAGGAGCT
AGTTGTCCAGCCTCTGTTGGTTTCAGTCAGCGCTTTGACCCTAGCAACTGAAACTGTTCGGAGCATTCTGAAAATTGATG
ATGTGGTAAACACACGATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003083 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008703 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000016982 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015263 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013973 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002882 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000010539 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_1041 | 90.73 | 91.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_1931 | 93.33 | 97.22 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000003974 retrocopies