Parental gene:

GPBP1L1, ENSOGAG00000004134

Aliases:None
Description:GC-rich promoter binding protein 1-like 1 [Source:HGNC Symbol;Acc:28843]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873729.1:88944..113430(-)


>ENSOGAG00000004134
ATGGCGCAGCATGATTTTGTTCCTGCTTGGCTAAATTTCTCAACACCACAGTCAGCTAAGTCCCCTACTGCCACCTTTGA
AAAACACGGAGAGCATCTATCCCGAGGAGAAAGTAGATTTGGAGTGAGCCGTCGTCGACATAATTCCTCTGATGGCTTTT
TTAACAATGGATCCCTACGAACCATAGGAGATTCCTGGCATCAGCCCTCCCTGTTCCGCCATGATTCTGTGGACTCTGGT
GTCTCAAAGGGAGCATATGCTGGAATCCCAGGGAACCCATCTGGTTGGCATGGCTCTTCCCGAGGTCATGATTCTATGAG
CCAGCGTAGTGGAGGTGGTGTGGGGAACCATCGCCATTGGAATGGCAATGTCCATTCTCGTAAAGGCTGCTCCTTTCAGG
AAAGGCCACCTGCAGAGATTAGGGAAGAAAAGAAAGAAGACAAGGTGGAAAAGTTGCAGTTTGAAGAAGACGACTTTCCT
TCTTTGAATCCAGAAGCTGGCAAACAGAATCAGCCATGCAGACCTTTTGGGACCCCTTCTGGAGTGTGGGAAAACCCACC
TAGTGCCAAGCAACCCTCCAAAATGCTAGTTATCAAAAAAGTTTCCAAAGAGGATCCTGCTGCTGCCTTCGCTGCTGCAT
TCACCTCACCAGGATCTCACCCCGCAAATGGAAACAAATCATCCTCCATAGTTCCAAGTGTCTATAAGAACCTGGTTCCT
AAGCCTGTACCACCTCCTTCTAAGCCCAGTGCATGGAAAGCTAACAGAATGGACCACAAATCAGGATCCCTTTCCTCTAG
CCGGGAGTGTGCTTTTACCAATCCAATCTCTGTCACTAAACCAGTGCTACTGGCTGCTGGTGCAGTTCTGAGTTCTCCCA
AAGAGAGTCCGTCCAGCATCACCCCTCCAGTTGAGATCAGCTCTTCTCGTCTGACGAAGTTGACCCGTAGAACCACTGAC
AGGAAGAGTGAATTCCTGAAGACTCTGAAGGATGGCCGGAATGGAGATTTCTCAGACAACAGAGACTGTGATAAGCTAGA
GGATATTAGGTTGGAGGATGACAGCACACCTGAACCAAAGCAAAATGGAGAGGAAGGCTGTCACCAGAATGGTCTTGCTC
TCCCAATACTGGAAGAAAGGGAGATTCTCTCACACTCTCTGGAAGCAGAGCACAGGTTATTGAAAGCAATGGGATGGCAG
GAATATCCTGAAAATGATGAAAACTGCCTTCCCCTTACAGAGGATGAGCTCAAAGAATTCCACATGAAGACAGAGCAGCT
GAGAAGAAATGGCTTTGGAAAGAATGGCTTTTTGCAGCGCCGCTGTTCCAGCCTGTTCTCCCCTTGGCGAAGCACTTGTA
AAGCAGAGTTTGAGGCTTCAGACACAGAAACCAGTAGCAGTGAAACATCAGATGATGATGCCTGGAAATAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010454 possible_ortholog 1 retrogene
retro_chof_53,
Microcebus murinus ENSMICG00000008449 ortholog_one2one 1 retrogene
retro_mmur_164,
Myotis lucifugus ENSMLUG00000012432 possible_ortholog 2 retrogenes
retro_mluc_211, retro_mluc_834,
Mus musculus ENSMUSG00000034042 ortholog_one2one 2 retrogenes
retro_mmus_1391, retro_mmus_405,
Oryctolagus cuniculus ENSOCUG00000017939 ortholog_one2one 1 retrogene
retro_ocun_427,
Otolemur garnettii ENSOGAG00000013991 within_species_paralog 1 retrogene
retro_ogar_1077,
Ochotona princeps ENSOPRG00000001584 ortholog_one2one 1 retrogene
retro_opri_928,
Rattus norvegicus ENSRNOG00000037595 ortholog_one2many 1 retrogene
retro_rnor_390,
Ictidomys tridecemlineatus ENSSTOG00000013491 ortholog_one2one 1 retrogene
retro_itri_243,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1859 78.93 74.68
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Download FASTA sequences of all ENSOGAG00000004134 retrocopies