RetrogeneDB ID: | retro_mluc_211 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429934:981773..983195(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000003778 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000012432 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.53 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAQHDFVPAWLNFSTPQAVKSPTATFEKHGEHLPRGDGRFGVSR-RRHNSSDGFFNNGPLRTTGDSWHQP |
MAQHDFVPAWL.FSTPQAVKSPTATFEKHGEHLPRGDGRFGVSR.RRHN.SDGFFNNGPLRTT.DSWHQP | |
Retrocopy | MAQHDFVPAWLHFSTPQAVKSPTATFEKHGEHLPRGDGRFGVSRHRRHNFSDGFFNNGPLRTT-DSWHQP |
Parental | SLFRHDSVDSGVSKGAYAGITGNLSGWHGSSRGHDGMSQRSGGGTGNHRHWNGSFHSRKGCAFQEKPPAE |
.LF.HDSVDS.VSKGAY.GITGNLSGWHGSSRGHDGMSQRS.GG.GNH.HWNGSFHSRKGCAFQEKPPAE | |
Retrocopy | FLFPHDSVDSSVSKGAYTGITGNLSGWHGSSRGHDGMSQRSWGGAGNHHHWNGSFHSRKGCAFQEKPPAE |
Parental | IREERKEEKVEKLQFEEEDFPSLNPEAGKQNQPCRPIGTPSGVWENPPGAKQTSKMLVIKKVSKEDPAAT |
IREE.KE..VEKLQFEEEDFP.LNPEAGKQNQPCRPIGTPSGVWENPPGAKQTSKMLVIKKVSKEDPAA. | |
Retrocopy | IREEKKEDEVEKLQFEEEDFP-LNPEAGKQNQPCRPIGTPSGVWENPPGAKQTSKMLVIKKVSKEDPAAA |
Parental | FSAAFTSPGSHYANGNKSSNMVPSVYKNLVPKPAPPPSKPSAWKANRMEHKSGSLSSSRESAFTSPISVT |
FSAAFTS.GSHYANGNK.SNMVPSVYKNLVPKPAPPPSKPSAWKANRMEHKSGSLS.S.ESAFTSPIS.T | |
Retrocopy | FSAAFTSTGSHYANGNKLSNMVPSVYKNLVPKPAPPPSKPSAWKANRMEHKSGSLSTSQESAFTSPISGT |
Parental | KPVVLAGGAVLSSPKESPSSTTPPIEISSSRLTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLEDL |
KPVVLAGGAVLSSPK.SPSSTTPPIEISSS.LTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLEDL | |
Retrocopy | KPVVLAGGAVLSSPKKSPSSTTPPIEISSSHLTKLTRRTTDRKSEFLKTLKDDRNGDFSENRDCDKLEDL |
Parental | EDNSTPEPKENGEEGCHQNGLPLPVEEEGEVLSHSLEAEHRLLKAMGWQEYPENDENYLPLTEDELKEFH |
EDNSTPEPKENGEE.CHQNGLPLPVEEEGEVLSHSLEAEHRLLKAMGWQEYP.NDENYLPLTEDELKE.H | |
Retrocopy | EDNSTPEPKENGEESCHQNGLPLPVEEEGEVLSHSLEAEHRLLKAMGWQEYPGNDENYLPLTEDELKESH |
Parental | MKTEQLRRNGFGKNGFLQSRTSSLFSPWRSTCKAEFEDSDTETSSSETSDDDAWK |
MKTEQLRRNGFGKNGFLQSRTSSLFSPWRSTCKAEFEDSDTETSSSETSDDDAWK | |
Retrocopy | MKTEQLRRNGFGKNGFLQSRTSSLFSPWRSTCKAEFEDSDTETSSSETSDDDAWK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000010454 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000008449 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000007462 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000012432 | 2 retrocopies |
retro_mluc_211 , retro_mluc_834,
|
Mus musculus | ENSMUSG00000034042 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000017939 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000004134 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000001584 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000037595 | 1 retrocopy | |
Sorex araneus | ENSSARG00000004852 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000013491 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000012202 | 1 retrocopy |