Parental gene:

EIF4A1, ENSOGAG00000008132

Aliases:None
Description:eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:3282]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873565.1:11746853..11754144(-)


>ENSOGAG00000008132
ATGTCTGCGAGCCAGGATTCCCGCAACAGATCCAGAGACAATGGACCTGATGGGATGGAGCCCGAAGGCGTCATCGAGAG
TAACTGGAACGAGATTGTTGACAGCTTTGATGACATGAACCTCTCGGAGTCCCTCCTCCGTGGTATCTATGCCTATGGTT
TTGAGAAGCCTTCTGCCATCCAGCAGCGAGCCATTCTTCCTTGTATCAAGGGTTATGATGTGATCGCTCAAGCCCAATCT
GGGACTGGGAAAACAGCCACATTTGCTATCTCGATTTTGCAGCAGATTGAATTGGATCTAAAGGCCACTCAGGCCTTGGT
CTTGGCACCCACTCGAGAACTGGCTCAGCAGATACAGAAGGTGGTTATGGCATTAGGAGACTACATGGGTGCCTCCTGTC
ATGCCTGCATTGGAGGCACCAACGTTCGTGCTGAAGTGCAAAAACTGCAAATGGAAGCTCCCCATATCATCGTGGGTACC
CCTGGCCGAGTATTTGATATGCTTAACCGGAGATACCTGTCTCCCAAATACATCAAGATGTTTGTACTAGATGAAGCTGA
TGAAATGCTAAGCCGTGGATTTAAGGACCAGATATATGACATATTCCAGAAGCTCAACAGCAACACCCAGGTGGTTTTGC
TGTCAGCTACAATGCCTTCTGATGTGCTTGAGGTGACCAAGAAGTTCATGAGGGACCCCATTCGGATTCTTGTCAAGAAG
GAAGAGTTGACCCTGGAGGGTATCCGCCAATTCTACATCAATGTGGAACGAGAGGAGTGGAAGCTGGATACACTGTGTGA
CTTGTATGAAACCCTGACCATCACCCAGGCAGTCATCTTCATCAACACCCGAAGGAAGGTTGATTGGCTCACTGAGAAGA
TGCATGCCCGAGATTTCACTGTGTCTGCCATGCATGGAGATATGGACCAAAAGGAACGAGATGTGATCATGAGGGAGTTC
CGTTCTGGCTCTAGCCGAGTACTGATTACCACTGACCTGCTGGCCAGAGGCATAGATGTGCAGCAGGTTTCTTTAGTCAT
CAACTATGATCTTCCTACCAACAGAGAAAACTATATCCACAGAATCGGTCGTGGTGGAAGGTTTGGCCGTAAGGGTGTGG
CTATCAACATGGTGACAGAAGAAGACAAGAGGACTCTTAGAGACATCGAGACCTTCTATAACACCTCCATTGAGGAGATG
CCCCTCAACGTTGCAGACCTCATCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016753 ortholog_one2one 1 retrogene
retro_amel_1300,
Callithrix jacchus ENSCJAG00000015114 ortholog_one2one 8 retrogenes
retro_cjac_1876, retro_cjac_2046, retro_cjac_2521, retro_cjac_2679, retro_cjac_3086, retro_cjac_3203, retro_cjac_395, retro_cjac_727,
Dipodomys ordii ENSDORG00000014225 ortholog_one2one 1 retrogene
retro_dord_732,
Macropus eugenii ENSMEUG00000010780 ortholog_one2one 2 retrogenes
retro_meug_158, retro_meug_179,
Microcebus murinus ENSMICG00000014759 ortholog_one2one 2 retrogenes
retro_mmur_1164, retro_mmur_1477,
Myotis lucifugus ENSMLUG00000003415 possible_ortholog 3 retrogenes
retro_mluc_1047, retro_mluc_1229, retro_mluc_1805,
Macaca mulatta ENSMMUG00000013499 possible_ortholog 1 retrogene
retro_mmul_1280,
Monodelphis domestica ENSMODG00000007090 ortholog_one2one 3 retrogenes
retro_mdom_1282, retro_mdom_326, retro_mdom_711,
Otolemur garnettii ENSOGAG00000007495 within_species_paralog 1 retrogene
retro_ogar_212,
Otolemur garnettii ENSOGAG00000010729 within_species_paralog 2 retrogenes
retro_ogar_2830, retro_ogar_943,
Ochotona princeps ENSOPRG00000008591 ortholog_one2one 2 retrogenes
retro_opri_155, retro_opri_985,
Sorex araneus ENSSARG00000006017 possible_ortholog 7 retrogenes
retro_sara_224, retro_sara_383, retro_sara_461, retro_sara_567, retro_sara_6, retro_sara_605, retro_sara_89,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1375 70.75 51.47
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2. retro_ogar_1862 95.73 68.63
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Download FASTA sequences of all ENSOGAG00000008132 retrocopies