Parental gene: | OXCT1, ENSOGAG00000009909 |
| Aliases: | None |
| Description: | 3-oxoacid CoA transferase 1 [Source:HGNC Symbol;Acc:8527] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873582.1:9037926..9168048(-) |
>ENSOGAG00000009909
ATGGCCGCCTTCAAATTCCTCTCCCCCGGGCTGCGGCTCTGCACCTCCGCCCGCGGCTTCAAGGGCGCCTGGTCCCAGGG
ATGTGTTTGCTACTTTTCTACTAGTTCTCATCGCCTTACCAAATTTTATACAGATCCAGTGGAAGCTGTAAAAGACATCC
CCGATGGTGCAAGGATTCTGGTTGGTGGTTTTGGCCTGTGTGGAATTCCAGAGAATCTTATAGGAGCTTTACTAAAGACT
GGAGTGAAAGGACTAACTGCAGTTAGCAACAATGCTGGGGTTGACAACTTTGGCTTGGGCCTTTTACTTCAGTCCAAGCA
GATAAAACGTATGATCTCTTCCTACGTGGGAGAAAATGTGGAATTTGAACGACAGTACTTAGCTGGTGAATTAGAAGTAG
AGCTGACACCTCAGGGCACACTTGCAGAGAGGATTCGTGCAGGCGGGGCTGGCGTTCCTGCGTTTTACACCAGCACAGGG
TATGGGACCCTGGTACAAGAAGGGGGAGCGCCCATCAAGTACAACAAAGACGGCAGCGTTGCCATTGCCAGTAAGCCAAG
AGAGGTGAGGGAGTTCAATGGCCAGCACTTTATAATGGAGGAAGCCATTACAGGGGATTTTGCTTTGGTGAAAGCCTGGA
AGGCAGACCGAGCAGGAAATGTGATTTTCAGGAAAAGCGCAAGGAATTTCAATTTGCCGATGTGCAAAGCTGCAGAAATA
ACAGTGGTGGAGGTTGAAGAAATTGTGGATATTGGCACATTTGCTCCAGAAGACATTCATATTCCTCAGATTTATGTACA
TCGCCTTATAAAGGGAGAAAAATACGAGAAAAGAATTGAGCGTTTATCAATCCGGAAAGATGGAGATGGAAAAGCCAAAT
CTGGGAAGTCTGGAGATGATATAAGGGAACGGATCATCAAGCGGGCAGCTCTTGAGTTTGAGGATGGCATGTATGCTAAT
TTGGGCATTGGAATCCCTCTTCTGGCCAGCAATTTTATTAGCCCAGATATGACTGTTCATCTTCAAAGTGAAAATGGAGT
CCTGGGTTTGGGTCCATATCCACTACAACATGAAGCGGATGCAGATCTAATTAATGCAGGCAAGGAAACAGTTACTATTC
TTCCAGGAGCCTCTTTTTTCTCCAGCGATGAATCATTTGCAATGATTAGAGGGGGACATGTCAATCTCACAATGCTAGGA
GCAATGCAGGTTTCCAAATATGGTGACCTGGCTAATTGGATGATTCCTGGAAAGATGGTGAAAGGAATGGGTGGTGCTAT
GGATTTAGTGTCCAGTGCCAAAACCAAAGTGGTTGTCACCATGGAGCATTCTGCAAAGGGAAACACACATAAAATCATGG
AGAAATGTACGTTACCACTGACTGGAAAGCAATGTGTCAACCGCATTATTACTGAAAAGGCTGTGTTCGACGTGGACAAG
AAGAAAGGACTAACTCTGATTGAGCTCTGGGAGGGCCTGACAGTGGAGGACATAAAGGAGAGCACGGGGTGTGATTTTGC
AGTAAGTGTTTCTGTGAACAAATCCAGCCAATTACCCTAT
ATGGCCGCCTTCAAATTCCTCTCCCCCGGGCTGCGGCTCTGCACCTCCGCCCGCGGCTTCAAGGGCGCCTGGTCCCAGGG
ATGTGTTTGCTACTTTTCTACTAGTTCTCATCGCCTTACCAAATTTTATACAGATCCAGTGGAAGCTGTAAAAGACATCC
CCGATGGTGCAAGGATTCTGGTTGGTGGTTTTGGCCTGTGTGGAATTCCAGAGAATCTTATAGGAGCTTTACTAAAGACT
GGAGTGAAAGGACTAACTGCAGTTAGCAACAATGCTGGGGTTGACAACTTTGGCTTGGGCCTTTTACTTCAGTCCAAGCA
GATAAAACGTATGATCTCTTCCTACGTGGGAGAAAATGTGGAATTTGAACGACAGTACTTAGCTGGTGAATTAGAAGTAG
AGCTGACACCTCAGGGCACACTTGCAGAGAGGATTCGTGCAGGCGGGGCTGGCGTTCCTGCGTTTTACACCAGCACAGGG
TATGGGACCCTGGTACAAGAAGGGGGAGCGCCCATCAAGTACAACAAAGACGGCAGCGTTGCCATTGCCAGTAAGCCAAG
AGAGGTGAGGGAGTTCAATGGCCAGCACTTTATAATGGAGGAAGCCATTACAGGGGATTTTGCTTTGGTGAAAGCCTGGA
AGGCAGACCGAGCAGGAAATGTGATTTTCAGGAAAAGCGCAAGGAATTTCAATTTGCCGATGTGCAAAGCTGCAGAAATA
ACAGTGGTGGAGGTTGAAGAAATTGTGGATATTGGCACATTTGCTCCAGAAGACATTCATATTCCTCAGATTTATGTACA
TCGCCTTATAAAGGGAGAAAAATACGAGAAAAGAATTGAGCGTTTATCAATCCGGAAAGATGGAGATGGAAAAGCCAAAT
CTGGGAAGTCTGGAGATGATATAAGGGAACGGATCATCAAGCGGGCAGCTCTTGAGTTTGAGGATGGCATGTATGCTAAT
TTGGGCATTGGAATCCCTCTTCTGGCCAGCAATTTTATTAGCCCAGATATGACTGTTCATCTTCAAAGTGAAAATGGAGT
CCTGGGTTTGGGTCCATATCCACTACAACATGAAGCGGATGCAGATCTAATTAATGCAGGCAAGGAAACAGTTACTATTC
TTCCAGGAGCCTCTTTTTTCTCCAGCGATGAATCATTTGCAATGATTAGAGGGGGACATGTCAATCTCACAATGCTAGGA
GCAATGCAGGTTTCCAAATATGGTGACCTGGCTAATTGGATGATTCCTGGAAAGATGGTGAAAGGAATGGGTGGTGCTAT
GGATTTAGTGTCCAGTGCCAAAACCAAAGTGGTTGTCACCATGGAGCATTCTGCAAAGGGAAACACACATAAAATCATGG
AGAAATGTACGTTACCACTGACTGGAAAGCAATGTGTCAACCGCATTATTACTGAAAAGGCTGTGTTCGACGTGGACAAG
AAGAAAGGACTAACTCTGATTGAGCTCTGGGAGGGCCTGACAGTGGAGGACATAAAGGAGAGCACGGGGTGTGATTTTGC
AGTAAGTGTTTCTGTGAACAAATCCAGCCAATTACCCTAT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000033186 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000016318 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000018312 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000083720 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025087 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009431 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016656 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009231 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015428 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000016829 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000043094 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000008271 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013641 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004331 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000002550 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_2773 | 69.79 | 55.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_2781 | 69.79 | 55.19 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000009909 retrocopies