Parental gene:

ENSOPRG00000011793

Aliases:None
Description:None
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_2252:207102..215370(-)


>ENSOPRG00000011793
ATGGCGGAACGCGGATACAGTTTTTCGCTGACTACATTCAGCCCCTCTGGTAAACTTGTCCAGATTGAATATGCTTTGGC
TGCTGTGGCTGGAGGAGCCCCTTCAGTGGGAATTAAAGCTGCCAATGGAGTGGTGTTAGCAACAGAGAAGAAACAGAAAT
CCATTCTGTATGATGAGCGAAGTGTGCACAAGGTGGAGCCCATCACCAAGCACATAGGCTTGGTGTACAGCGGCATGGGC
CCCGACTACAGAGTGCTTGTGCACAGAGCTCGGAAACTCGCCCAGCAGTACTACCTGGTTTACCAGGAGCCCATCCCCAC
GGCTCAGCTGGTGCAGAGAGTGGCGTCGGTGATGCAGGAGTACACCCAGTCAGGTGGTGTTCGTCCTTTTGGAGTTTCTT
TACTTATTTGTGGTTGGAACGAGGGACGACCATATTTATTTCAGTCAGATCCATCCGGAGCCTTTGCCTGGAAAGCCACA
GCAATGGGAAAGAACTATGTGAATGGGACTTTCCTTGAGAAGAGATACAATGAAGATCTGGAACTTGAAGATGCTATTCA
TACAGCCATCTTAACCCTGAAGGAAAGCTTTGAAGGGCAAATGACAGAAGATAACATAGAAGTTGGCATCTGTAATGAAG
CTGGATTCAGGAGGCTTACCCCGACTGAGGTTAAGGACTACCTGGCTGCCATAGCATAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000990 ortholog_one2one 3 retrogenes
retro_btau_296, retro_btau_384, retro_btau_889,
Choloepus hoffmanni ENSCHOG00000000644 ortholog_one2one 1 retrogene
retro_chof_893,
Callithrix jacchus ENSCJAG00000007730 ortholog_one2one 4 retrogenes
retro_cjac_1096, retro_cjac_1868, retro_cjac_2583, retro_cjac_852,
Cavia porcellus ENSCPOG00000013134 ortholog_one2one 1 retrogene
retro_cpor_1512,
Dasypus novemcinctus ENSDNOG00000011910 ortholog_one2one 2 retrogenes
retro_dnov_2202, retro_dnov_724,
Echinops telfairi ENSETEG00000015835 ortholog_one2one 2 retrogenes
retro_etel_1569, retro_etel_2022,
Homo sapiens ENSG00000106588 ortholog_one2many 2 retrogenes
retro_hsap_2199, retro_hsap_908,
Gorilla gorilla ENSGGOG00000006538 ortholog_one2one 1 retrogene
retro_ggor_735,
Myotis lucifugus ENSMLUG00000010086 possible_ortholog 2 retrogenes
retro_mluc_1050, retro_mluc_135,
Macaca mulatta ENSMMUG00000022451 ortholog_one2one 2 retrogenes
retro_mmul_1114, retro_mmul_923,
Nomascus leucogenys ENSNLEG00000003177 ortholog_one2one 1 retrogene
retro_nleu_329,
Oryctolagus cuniculus ENSOCUG00000012092 ortholog_one2one 1 retrogene
retro_ocun_774,
Pongo abelii ENSPPYG00000017612 ortholog_one2one 2 retrogenes
retro_pabe_2076, retro_pabe_783,
Pan troglodytes ENSPTRG00000019120 ortholog_one2one 2 retrogenes
retro_ptro_1670, retro_ptro_628,
Ictidomys tridecemlineatus ENSSTOG00000013334 ortholog_one2one 1 retrogene
retro_itri_223,
Tarsius syrichta ENSTSYG00000014299 ortholog_one2one 2 retrogenes
retro_tsyr_132, retro_tsyr_246,
Tursiops truncatus ENSTTRG00000005649 ortholog_one2one 1 retrogene
retro_ttru_356,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_135 84.06 58.62
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2. retro_opri_791 84.06 58.62
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Download FASTA sequences of all ENSOPRG00000011793 retrocopies