RetrogeneDB ID: | retro_etel_2022 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_33155:603..1160(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000015835 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.8 % |
Parental protein coverage: | 79.49 % |
Number of stop codons detected: | 6 |
Number of frameshifts detected | 1 |
Parental | ATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRAR-KLAQQYYLVYQEPIPTAQLVQRVA |
AT..KQKSILY...S.H.V.PITKH.GLVY.G.GPD.RVLVHR.R..LAQQ..LVYQEPIPT.QLVQR.A | |
Retrocopy | ATDQKQKSILYEQ*SIHTVKPITKHRGLVYTGVGPD*RVLVHRTR<ELAQQC*LVYQEPIPTVQLVQRIA |
Parental | SVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELE |
S.MQEYTQSGGV.PFGVSL.ICGWNEG.P.LFQS.P.GAYFA.KAT.MGKN.VNG..FLE.RYN.DLE.E | |
Retrocopy | SFMQEYTQSGGVCPFGVSL*ICGWNEG*PDLFQSGPFGAYFA*KATVMGKNDVNGEFFLERRYNKDLEFE |
Parental | DAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAA |
.AIHTA.L.LKESFEGQM.ED...VGI.NEA..RRL.P..V.D.LAA | |
Retrocopy | EAIHTASLPLKESFEGQMKEDDVAVGIFNEAALRRLIPADVNDCLAA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |