Parental gene:

CMPK1, ENSPPYG00000001380

Aliases:None
Description:cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Source:HGNC Symbol;Acc:18170]
Organism:Orangutan (Pongo abelii)
Coordinates:1:182464439..182512183(-)


>ENSPPYG00000001380
ATGCTGAGCCGCTACCACAGCCGGCTGCTCCACGTCCTGGGCCTTAGCTTCCTGCTGCAGAGCCGCCGGCCGATTCTCCT
CTGCCCTCCACGTCTCATGAAGCCGCTGGTCGTGTTCGTCCTTGGCGGCCCCGGCGCTGGCAAGGGGACCCAGTGCTCCC
GCATCGTCGAGAAATATGGCTACACACACCTTTCTGCAGGAGAGCTGCTTCGTGATGAAAGGAAGAACCCAGATTCACAG
TATGGTGAACTTATTGAAAAGTACATTAAAGAAGGAAAGATTGTACCAGTTGAGATAACCATCAGTTTATTAAAGAGGGA
AATGGATCAGACAATGGCTGCCAATGCTCAGAAGAATAAATTCTTGATTGATGGGTTTCCAAGAAATCAAGACAACCTTC
AAGGTTGGAACAAGACCATGGATGGGAAGGCAGATGTATCTTTCGTTCTGTTTTTTGACTGTAATAATGAGATCTGTATT
GAACGATGTCTTGAGAGGGGAAAGAGTAGTGGTAGGAGTGATGACAACAGAGAGAGCTTGGAAAAGAGAATTCAGACCTA
CCTTCAGTCAACAAAGCCAATTATTGACTTATATGAAGAAATGGGGAAAGTCAAGAAAATAGATGCTTCTAAATCTGTTG
ATGAAGTTTTTGATGAAGTTGTGCAGATTTTTGACAAGGAAGGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .36 RPM
SRP007412_cerebellum 20 .19 RPM
SRP007412_heart 12 .64 RPM
SRP007412_kidney 23 .77 RPM
SRP007412_liver 32 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000012 ortholog_one2one 2 retrogenes
retro_amel_1074, retro_amel_1711,
Choloepus hoffmanni ENSCHOG00000004014 ortholog_one2many 2 retrogenes
retro_chof_609, retro_chof_840,
Callithrix jacchus ENSCJAG00000021250 ortholog_one2one 2 retrogenes
retro_cjac_2652, retro_cjac_2992,
Felis catus ENSFCAG00000025426 ortholog_one2one 1 retrogene
retro_fcat_1259,
Macaca mulatta ENSMMUG00000017375 ortholog_one2many 2 retrogenes
retro_mmul_1572, retro_mmul_66,
Otolemur garnettii ENSOGAG00000026904 ortholog_one2one 2 retrogenes
retro_ogar_1589, retro_ogar_3204,
Sorex araneus ENSSARG00000009745 ortholog_one2one 2 retrogenes
retro_sara_199, retro_sara_294,
Sus scrofa ENSSSCG00000003885 possible_ortholog 1 retrogene
retro_sscr_454,
Tupaia belangeri ENSTBEG00000017494 ortholog_one2one 2 retrogenes
retro_tbel_3597, retro_tbel_691,
Tarsius syrichta ENSTSYG00000007511 ortholog_one2one 1 retrogene
retro_tsyr_319,
Vicugna pacos ENSVPAG00000004127 ortholog_one2one 2 retrogenes
retro_vpac_345, retro_vpac_373,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1369 70.40 53.07
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Download FASTA sequences of all ENSPPYG00000001380 retrocopies