Parental gene:

SAR1A, ENSPPYG00000002374

Aliases:None
Description:GTP-binding protein SAR1a [Source:UniProtKB/Swiss-Prot;Acc:Q5R548]
Organism:Orangutan (Pongo abelii)
Coordinates:10:65152966..65172879(+)


>ENSPPYG00000002374
ATGTCTTTCATCTTTGAGTGGATCTACAATGGCTTCAGCAGTGTGCTCCAGTTCCTAGGACTGTACAAGAAATCTGGAAA
ACTTGTATTCTTAGGTTTGGATAATGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGCCAACATG
TTCCAACACTACATCCGACATCAGAAGAGCTAACAATTGCTGGAATGACCTTTACAACTTTTGATCTTGGTGGGCACGAG
CAAGCACGTCGGGTTTGGAAAAATTATCTCCCAGCAATTAATGGGATTGTCTTTCTGGTGGACTGTGCAGATCATTCTCG
CCTCGTGGAATCCAAAGTTGAGCTTAATGCTTTAATGACTGATGAAACAATATCCAATGTGCCAATCCTTATCTTGGGTA
ACAAAATTGACAGAACAGATGCAATCAGTGAAGAAAAACTCCGTGAGATATTTGGGCTTTATGGACAGACCACGGGAAAG
GGGAATGTGACCCTGAAGGAGCTGAATGCTCGCCCCATGGAAGTGTTCATGTGCAGTGTGCTCAAGAGGCAAGGTTACGG
CGAGGGTTTCCGCTGGCTCTCCCAGTATATTGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 70 .16 RPM
SRP007412_cerebellum 63 .96 RPM
SRP007412_heart 38 .23 RPM
SRP007412_kidney 65 .27 RPM
SRP007412_liver 74 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016353 ortholog_one2one 5 retrogenes
retro_cjac_1006, retro_cjac_2242, retro_cjac_2305, retro_cjac_4081, retro_cjac_957,
Homo sapiens ENSG00000079332 ortholog_one2one 4 retrogenes
retro_hsap_2976, retro_hsap_3568, retro_hsap_4714, retro_hsap_639,
Gorilla gorilla ENSGGOG00000024879 ortholog_one2one 3 retrogenes
retro_ggor_144, retro_ggor_2408, retro_ggor_2929,
Myotis lucifugus ENSMLUG00000006626 ortholog_one2one 2 retrogenes
retro_mluc_1317, retro_mluc_1996,
Nomascus leucogenys ENSNLEG00000011243 ortholog_one2one 4 retrogenes
retro_nleu_1987, retro_nleu_2231, retro_nleu_2311, retro_nleu_2759,
Otolemur garnettii ENSOGAG00000005040 ortholog_one2one 3 retrogenes
retro_ogar_1447, retro_ogar_1981, retro_ogar_2467,
Pan troglodytes ENSPTRG00000002584 ortholog_one2one 4 retrogenes
retro_ptro_2011, retro_ptro_2423, retro_ptro_3133, retro_ptro_465,
Ictidomys tridecemlineatus ENSSTOG00000012780 ortholog_one2one 2 retrogenes
retro_itri_1191, retro_itri_590,
Tupaia belangeri ENSTBEG00000008657 ortholog_one2one 5 retrogenes
retro_tbel_1060, retro_tbel_14, retro_tbel_2319, retro_tbel_2366, retro_tbel_2846,
Tarsius syrichta ENSTSYG00000005955 ortholog_one2one 2 retrogenes
retro_tsyr_1204, retro_tsyr_2099,
Vicugna pacos ENSVPAG00000002631 ortholog_one2one 2 retrogenes
retro_vpac_5, retro_vpac_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_565 70.37 68.18
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2. retro_pabe_2468 83.96 53.54
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3. retro_pabe_2940 86.43 100.00
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4. retro_pabe_3661 81.41 100.00
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Download FASTA sequences of all ENSPPYG00000002374 retrocopies