Parental gene:

SAR1A, ENSSTOG00000012780

Aliases:None
Description:SAR1 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:10534]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393331.1:8427702..8437637(+)


>ENSSTOG00000012780
ATGTCTTTCATCTTTGAGTGGATCTACAATGGCTTCAGCAGTGTGCTCCAGTTCCTAGGACTCTACAAGAAATCTGGAAA
ACTTGTATTCTTGGGTTTGGACAATGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGCCAACATG
TTCCAACACTACATCCAACATCAGAAGAGCTGACAATTGCTGGAATGACTTTTACAACTTTTGATCTTGGTGGGCATGAG
CAAGCTCGTCGGGTTTGGAAAAATTATCTTCCAGCAATTAATGGGATTGTCTTTCTGGTGGACTGTGCAGATCATTCTCG
CCTCATGGAATCCAAAGTTGAGCTTAATGCTTTAATGACTGATGAAACAATATCCAATGTGCCAATCCTTATCTTGGGAA
ACAAAATTGACAGAACAGATGCAATCAGTGAAGAAAAACTTCGTGAGATATTTGGGCTTTATGGACAGACCACAGGAAAG
GGGAATGTGACTCTGAAGGAACTGAATGCCCGCCCCATGGAAGTGTTTATGTGCAGTGTGCTCAAGAGGCAAGGCTACGG
CGAGGGTTTCCGCTGGCTCTCCCAGTATATTGACTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016353 ortholog_one2one 5 retrogenes
retro_cjac_1006, retro_cjac_2242, retro_cjac_2305, retro_cjac_4081, retro_cjac_957,
Homo sapiens ENSG00000079332 ortholog_one2one 4 retrogenes
retro_hsap_2976, retro_hsap_3568, retro_hsap_4714, retro_hsap_639,
Gorilla gorilla ENSGGOG00000024879 ortholog_one2many 3 retrogenes
retro_ggor_144, retro_ggor_2408, retro_ggor_2929,
Myotis lucifugus ENSMLUG00000006626 ortholog_one2one 2 retrogenes
retro_mluc_1317, retro_mluc_1996,
Nomascus leucogenys ENSNLEG00000011243 ortholog_one2one 4 retrogenes
retro_nleu_1987, retro_nleu_2231, retro_nleu_2311, retro_nleu_2759,
Otolemur garnettii ENSOGAG00000005040 ortholog_one2one 3 retrogenes
retro_ogar_1447, retro_ogar_1981, retro_ogar_2467,
Pongo abelii ENSPPYG00000002374 ortholog_one2one 4 retrogenes
retro_pabe_2468, retro_pabe_2940, retro_pabe_3661, retro_pabe_565,
Pan troglodytes ENSPTRG00000002584 ortholog_one2one 4 retrogenes
retro_ptro_2011, retro_ptro_2423, retro_ptro_3133, retro_ptro_465,
Ictidomys tridecemlineatus ENSSTOG00000011326 within_species_paralog 1 retrogene
retro_itri_1714,
Tupaia belangeri ENSTBEG00000008657 ortholog_one2one 5 retrogenes
retro_tbel_1060, retro_tbel_14, retro_tbel_2319, retro_tbel_2366, retro_tbel_2846,
Tarsius syrichta ENSTSYG00000005955 ortholog_one2one 2 retrogenes
retro_tsyr_1204, retro_tsyr_2099,
Vicugna pacos ENSVPAG00000002631 ortholog_one2one 2 retrogenes
retro_vpac_5, retro_vpac_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_590 60.32 62.12
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2. retro_itri_1191 76.38 100.00
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Download FASTA sequences of all ENSSTOG00000012780 retrocopies