Parental gene:

MTIF3, ENSPPYG00000005236

Aliases:None
Description:mitochondrial translational initiation factor 3 [Source:HGNC Symbol;Acc:29788]
Organism:Orangutan (Pongo abelii)
Coordinates:13:26872439..26886240(-)


>ENSPPYG00000005236
ATGGCTGCTCTTTTTCTAAAGAGGTTAACACTACAAACTGTAAAGTCTGAAAATAGTTGCATTAGATGTTTTGGTAAACA
CATCGTGCAAAAGACAGCACCAACACAGTTGTCCCCTATTGCTTCTGCCCCAAGACTCTCCTTCCTAATTCATGCAAAAG
CCTTTAGTACCGCTGAAGACACCCAGAATGAAGGAAAAAAGAAAAAAAAGAATAAAACAGCTTTTAGTAACATTGGAAGA
AAAATTAGTCAGCGAATTATTCACTTATTTGATGAGAAGGGCAATGATTTGGGAAACATGCATCGAGCAAATGTGATTAG
ACTTATGGATGAGCGACACCTGCGACTGGTTGAAAGGAACACCAGCACAGAACCTGCAGAGTACCAGCTCATGACAGGAC
TGCAGATCTTCCAGGAGCAGCAGAGGCTGAGGGAGATGGAGAAGGCGAGCCCCAAAACTGGACCAACCGTAAGAAAGGAG
CTGATTTTGTCTTCAAATATTGGACAACATGATTTGGACACAAAGACTAAACAGATTCAGCAGTGGATTAAGAAAAAACA
CCTAGTCCAGATTACTATAAAGAAAGGAAAAAATGTAGACGTGTCAGAAAATGAAATGGAGGAGATATTTCATCAAATAC
TCCAGACTATGCCTGGAATAGCTACATTCTCATCTAAGCCACAGGCTGTTCGAGGAAAAGCTTTAATGTGTGTTCTTCGT
GCTTTGAGCAAAAATGAAGAGAAGGCATATAGAGAAACTCAAGAGACCCAGGAAAGAGACACTTTGAACAAAGACCATGG
AAATGATAAGGAATCAAATGTTCTGCATCAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .57 RPM
SRP007412_cerebellum 11 .92 RPM
SRP007412_heart 14 .99 RPM
SRP007412_kidney 8 .52 RPM
SRP007412_liver 8 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004404 ortholog_one2one 1 retrogene
retro_chof_466,
Homo sapiens ENSG00000122033 ortholog_one2one 1 retrogene
retro_hsap_3284,
Gorilla gorilla ENSGGOG00000008409 ortholog_one2one 1 retrogene
retro_ggor_1318,
Nomascus leucogenys ENSNLEG00000000343 ortholog_one2one 1 retrogene
retro_nleu_1350,
Oryctolagus cuniculus ENSOCUG00000011721 ortholog_one2one 1 retrogene
retro_ocun_533,
Pan troglodytes ENSPTRG00000005732 ortholog_one2one 1 retrogene
retro_ptro_2221,
Tupaia belangeri ENSTBEG00000012276 ortholog_one2one 3 retrogenes
retro_tbel_4048, retro_tbel_4602, retro_tbel_760,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2713 78.98 56.32
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Download FASTA sequences of all ENSPPYG00000005236 retrocopies