Parental gene:

GRPEL1, ENSPPYG00000014573

Aliases:None
Description:grpE protein homolog 1, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001127196]
Organism:Orangutan (Pongo abelii)
Coordinates:4:5969725..5979356(+)


>ENSPPYG00000014573
ATGGCGGCTCAGTGCGTGAGGCTGGCGCGGCGCAGTCTTCCTACTTTGGCGTTGTCTCTCAGGCCATCTCCCCGGTTGTT
GTGTACAGCCACGAAACAAAAAAACAGTGGCCAGAACCTGGAAGAGGACATGGGTCAGAGTGAACAGAAGGCAGATCCTC
CTGCTACAGAGAAGACCCTCCTGGAAGAGAAGGTCAAGTTGGAGGAGCAGCTGAAGGAGACTGTGGAAAAATATAAACGA
GCTTTGGCAGACACTGAGAACTTACGGCAGAGGAGCCAGAAATTGGTGGAGGAGGCAAAATTNNNNGGCATTCAAGCCTT
CTGCAAGGACTTGTTGGAGGTGGCAGATGTTCTGGAGAAGGCAACACAGTGTGTTCCAAAAGAAGAAATTAAAGACGATA
ACCCTCACCTGAAGAACCTCTATGAGGGGCTGGTCATGACTGAAGTCCAGATCCAGAAGGTGTTCACAAAGCATGGCTTG
CTCAAGTTGAACCCTGTCGGAGCCAAGTTCGACCCTTATGAACATGAGGCCTTGTTCCACACACCGGTTGAGGGGAAGGA
GCCGGGCACAGTGGCCCTAGTTAGCAAAGTGGGGTACAAGCTGCATGGGCGCACTCTGAGACCCGCCCTGGTGGGGGTGG
TGAAGGAAGCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 37 .21 RPM
SRP007412_cerebellum 31 .74 RPM
SRP007412_heart 22 .76 RPM
SRP007412_kidney 42 .63 RPM
SRP007412_liver 38 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014364 ortholog_one2many 1 retrogene
retro_cfam_1776,
Homo sapiens ENSG00000109519 ortholog_one2one 3 retrogenes
retro_hsap_3746, retro_hsap_3864, retro_hsap_3870,
Loxodonta africana ENSLAFG00000002590 ortholog_one2many 1 retrogene
retro_lafr_535,
Monodelphis domestica ENSMODG00000002955 ortholog_many2many 1 retrogene
retro_mdom_28,
Mustela putorius furo ENSMPUG00000010471 ortholog_many2many 1 retrogene
retro_mputfur_32,
Nomascus leucogenys ENSNLEG00000011822 ortholog_one2one 1 retrogene
retro_nleu_2642,
Otolemur garnettii ENSOGAG00000032291 ortholog_one2one 1 retrogene
retro_ogar_1765,
Procavia capensis ENSPCAG00000011314 ortholog_one2many 1 retrogene
retro_pcap_388,
Pongo abelii ENSPPYG00000015933 within_species_paralog 2 retrogenes
retro_pabe_1063, retro_pabe_3764,
Pan troglodytes ENSPTRG00000015894 ortholog_one2one 3 retrogenes
retro_ptro_2544, retro_ptro_2633, retro_ptro_2636,
Sarcophilus harrisii ENSSHAG00000007667 ortholog_one2many 1 retrogene
retro_shar_766,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3235 66.90 64.06
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Download FASTA sequences of all ENSPPYG00000014573 retrocopies