Parental gene:

GRPEL2, ENSPPYG00000015933

Aliases:None
Description:grpE protein homolog 2, mitochondrial precursor [Source:RefSeq peptide;Acc:NP_001127040]
Organism:Orangutan (Pongo abelii)
Coordinates:5:151266492..151276152(+)


>ENSPPYG00000015933
ATGGCCGTAAGGTCGCTGTGGGCCTGCCGGCTGCGGGTGCAGCGCCTACTGGCCTGGAGTGCCGCGTGGGAGAGCAAGGG
ATGGCCGCTTCCATTCAGCACTGCCACCCAGAGAACTGCTGGTGAGGACTGCCGTTCTGAGGACCCTCCTGATGAGCTTG
GGCCCCCTCTTGCTGAACGAGCCTTAAGGGTAAAAGCTGTCAAACTGGAGAAAGAAGTCCAGGATTTAACAGTGAGATAC
CAGAGAGCTGTAGCTGATTGTGAAAACATAAGGAGGCGAACCCAGAGATGTGTGGAAGACGCCAAGATATTTGGAATCCA
GAGTTTCTGTAAGGACTTGGTGGAGGTGGCTGACATTTTGGAGAAGACTACAGAGTGCATTTCTGAAGAATCAGAGCCTG
AGGACCAAAAGCTCACTCTGGAGAAGGTCTTCCGAGGGTTGTTGCTTTTAGAAGCAAAGCTGAAAAGTGTATTTGCCAAG
CATGGTCTGGAGAAGCTGACACCCATTGGTGACAAATATGACCCCCATGAGCATGAACTCATCTGTCATGTGCCAGCTGG
TGTTGGGGTGCAGCCTGGCACTGTGGCATTAGTAAGACAAGATGGCTACAAACTTCATGGCCGCACCATTAGGCTTGCCC
AAGTGGAAGTGGCAGTGGAGTCTCAGAGAAGACTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .23 RPM
SRP007412_cerebellum 15 .81 RPM
SRP007412_heart 8 .61 RPM
SRP007412_kidney 6 .46 RPM
SRP007412_liver 5 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004070 ortholog_one2one 1 retrogene
retro_chof_1984,
Dipodomys ordii ENSDORG00000011142 ortholog_one2one 1 retrogene
retro_dord_353,
Felis catus ENSFCAG00000003624 ortholog_one2one 1 retrogene
retro_fcat_618,
Homo sapiens ENSG00000164284 ortholog_one2one 2 retrogenes
retro_hsap_1284, retro_hsap_4842,
Gorilla gorilla ENSGGOG00000005410 ortholog_one2one 2 retrogenes
retro_ggor_1008, retro_ggor_3021,
Macaca mulatta ENSMMUG00000021662 ortholog_one2one 1 retrogene
retro_mmul_1317,
Nomascus leucogenys ENSNLEG00000010160 ortholog_one2one 1 retrogene
retro_nleu_710,
Oryctolagus cuniculus ENSOCUG00000016138 ortholog_one2many 3 retrogenes
retro_ocun_89, retro_ocun_905, retro_ocun_943,
Otolemur garnettii ENSOGAG00000014326 ortholog_one2one 1 retrogene
retro_ogar_791,
Pongo abelii ENSPPYG00000014573 within_species_paralog 1 retrogene
retro_pabe_3235,
Pan troglodytes ENSPTRG00000017396 ortholog_one2one 2 retrogenes
retro_ptro_3226, retro_ptro_877,
Sorex araneus ENSSARG00000005467 ortholog_one2one 2 retrogenes
retro_sara_320, retro_sara_511,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1063 77.18 66.22
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2. retro_pabe_3764 82.74 100.00
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Download FASTA sequences of all ENSPPYG00000015933 retrocopies